Factsheet for TraesCS4D01G312300.3

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS1A01G184500.1
TraesCS1A01G308700.1
TraesCS1A01G308800.1
TraesCS1B01G192600.3
TraesCS1B01G319300.1
TraesCS1D01G192200.1
TraesCS1D01G308000.1
TraesCS2B01G113800.2
TraesCS3A01G184500.1
TraesCS3A01G191900.1
TraesCS3A01G335000.1
TraesCS3B01G219900.1
TraesCS3B01G365900.1
TraesCS3D01G188600.1
TraesCS3D01G194500.2
TraesCS3D01G328300.1
TraesCS4B01G131100.1
TraesCS4D01G126100.1
TraesCS5A01G057100.1
TraesCS5A01G057200.1
TraesCS5A01G139700.1
TraesCS5B01G059900.1
TraesCS5B01G137100.1
TraesCS5D01G068000.1
TraesCS5D01G068100.1
TraesCS5D01G153400.1
TraesCS7A01G111300.1
TraesCS7B01G009200.1
TraesCS7D01G106400.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G56580.1	TraesCS1A01G308700.1	AT2G41100.1	17360592
AT5G56580.1	TraesCS1A01G308800.1	AT2G41100.1	17360592
AT5G56580.1	TraesCS1B01G319300.1	AT2G41100.1	17360592
AT5G56580.1	TraesCS1D01G308000.1	AT2G41100.1	17360592
AT5G56580.1	TraesCS2B01G113800.2	AT2G41100.1	17360592
AT5G56580.1	TraesCS3A01G184500.1	AT2G41100.1	17360592
AT5G56580.1	TraesCS3A01G191900.1	AT2G41100.1	17360592
AT5G56580.1	TraesCS3A01G335000.1	AT2G41100.1	17360592
AT5G56580.1	TraesCS3B01G219900.1	AT2G41100.1	17360592
AT5G56580.1	TraesCS3B01G365900.1	AT2G41100.1	17360592
AT5G56580.1	TraesCS3D01G188600.1	AT2G41100.1	17360592
AT5G56580.1	TraesCS3D01G194500.2	AT2G41100.1	17360592
AT5G56580.1	TraesCS3D01G328300.1	AT2G41100.1	17360592
AT5G56580.1	TraesCS4B01G131100.1	AT2G41100.1	17360592
AT5G56580.1	TraesCS4D01G126100.1	AT2G41100.1	17360592
AT5G56580.1	TraesCS5A01G057100.1	AT2G41100.1	17360592
AT5G56580.1	TraesCS5A01G057200.1	AT2G41100.1	17360592
AT5G56580.1	TraesCS5A01G139700.1	AT2G41100.1	17360592
AT5G56580.1	TraesCS5B01G059900.1	AT2G41100.1	17360592
AT5G56580.1	TraesCS5B01G137100.1	AT2G41100.1	17360592
AT5G56580.1	TraesCS5D01G068000.1	AT2G41100.1	17360592
AT5G56580.1	TraesCS5D01G068100.1	AT2G41100.1	17360592
AT5G56580.1	TraesCS5D01G153400.1	AT2G41100.1	17360592
AT5G56580.1	TraesCS7A01G111300.1	AT2G43790.1	19513235
AT5G56580.1	TraesCS7B01G009200.1	AT2G43790.1	19513235
AT5G56580.1	TraesCS7D01G106400.1	AT2G43790.1	19513235
AT5G56580.1	TraesCS1A01G184500.1	AT4G01370.1	19513235
AT5G56580.1	TraesCS1B01G192600.3	AT4G01370.1	19513235
AT5G56580.1	TraesCS1D01G192200.1	AT4G01370.1	19513235

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G414600.1	Wheat	cytosol	100.0	100.0
TraesCS4B01G315300.1	Wheat	cytosol	99.72	99.72
Os01t0510100-01	Rice	cytosol, plasma membrane	93.8	93.8
EES03540	Sorghum	cytosol	93.24	93.24
Zm00001d043609_P001	Maize	cytosol, extracellular	92.39	92.39
GSMUA_Achr9P00100_001	Banana	extracellular, vacuole	69.58	79.42
PGSC0003DMT400014637	Potato	cytosol	76.9	77.12
Solyc03g119490.2.1	Tomato	cytosol, extracellular	76.06	76.27
VIT_11s0016g02970.t01	Wine grape	cytosol	76.06	76.27
KRH72031	Soybean	cytosol	75.49	75.71
KRH33212	Soybean	cytosol	75.49	75.28
AT5G56580.1	Thale cress	cytosol	70.99	70.79
CDY11913	Canola	cytosol	70.7	70.11
CDX88578	Canola	cytosol	70.7	70.11
Bra002806.1-P	Field mustard	cytosol	69.86	69.66
CDY32868	Canola	cytosol	49.86	69.14
CDY64969	Canola	cytosol	64.79	69.07
Bra006866.1-P	Field mustard	cytosol	66.48	67.82
CDY39283	Canola	plasma membrane, vacuole	61.69	62.04
TraesCS7D01G092900.1	Wheat	cytosol	57.75	58.74
TraesCS7D01G155100.1	Wheat	plastid	34.08	34.67
TraesCS6D01G328800.1	Wheat	cytosol, plastid	35.21	33.97
TraesCS4D01G048800.1	Wheat	cytosol, mitochondrion	31.83	33.83
TraesCS4D01G048500.1	Wheat	mitochondrion	31.55	32.65
TraesCS4D01G049100.1	Wheat	cytosol, mitochondrion	30.99	32.54
TraesCS4D01G239400.1	Wheat	mitochondrion	30.14	32.23
TraesCS4D01G047900.1	Wheat	mitochondrion	30.99	31.52
TraesCS1D01G399400.1	Wheat	cytosol, mitochondrion, plastid, vacuole	27.61	28.0
TraesCS5D01G549600.1	Wheat	cytosol	39.72	26.96
TraesCS5D01G130900.2	Wheat	cytosol	36.06	24.38
TraesCS5D01G203600.1	Wheat	cytosol	25.92	17.76
TraesCS6D01G139200.1	Wheat	cytosol	24.51	17.09
TraesCS2D01G232200.1	Wheat	cytosol	27.32	14.02
TraesCS6D01G335800.1	Wheat	cytosol	27.32	13.96
TraesCS7D01G232400.1	Wheat	cytosol	25.92	12.98
TraesCS5D01G402300.1	Wheat	cytosol	28.45	12.29
TraesCS1D01G185000.2	Wheat	cytosol, mitochondrion, nucleus	25.07	12.18

Protein Annotations

Gene3D:1.10.510.10	MapMan:13.4.4.1.3	MapMan:18.4.2.1	Gene3D:3.30.200.20	GO:GO:0000003	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004708	GO:GO:0004871	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006464
GO:GO:0006468	GO:GO:0007049	GO:GO:0007112	GO:GO:0007154	GO:GO:0007165	GO:GO:0007275
GO:GO:0008150	GO:GO:0008152	GO:GO:0009524	GO:GO:0009653	GO:GO:0009791	GO:GO:0009987
GO:GO:0010311	GO:GO:0016043	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	PFAM:PF00069	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR24361	PANTHER:PTHR24361:SF616	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	EnsemblPlantsGene:TraesCS4D01G312300	EnsemblPlants:TraesCS4D01G312300.3	TIGR:cd06623	:	:

Description

No Description!

Coordinates

chr4D:-:478242430..478254276

Molecular Weight (calculated)

40021.2 Da

IEP (calculated)

5.600

GRAVY (calculated)

-0.211

Length

355 amino acids

Sequence
(BLAST)

001: MRGKKPLKEL TLSVPAQETP VDKFLTASGT FKDGELRLNQ RGLQLISEEN GDEHQSTKMK VEDVQLSMDD LEMIQVIGKG SGGVVQLVRH KWVGTFYALK
101: GIQMNIQESV RKQIVQELKI NQATQSPHIV LCHQSFYHNG VIYLVLEYMD RGSLADIIKQ VKTILEPYLA VLCKQVLEGL LYLHHERHVI HRDIKPSNLL
201: VNHKGEVKIT DFGVSAVLAS SIGQRDTFVG TYNYMAPERI SGSSYDYKSD VWSLGLVILE CAIGRFPYTP PEGEGWLSFY ELLEAIVDQP PPSAPADQFS
301: PEFCSFISSC IQKDPAERMS ASELLNHAFI KKFEDKDLDL RILVESLEQP MNVPE

Best Arabidopsis Sequence Match ( AT5G56580.1 )
(BLAST)

001: MVKIKSNLKQ LKLSVPAQES PISSFLTASG TFHDGDFLLN QKGLRLTSDE KQSRQSDSKE LDFEITAEDL ETVKVIGKGS GGVVQLVRHK WVGKFFAMKV
101: IQMNIQEEIR KQIVQELKIN QASSQCPHVV VCYHSFYHNG AFSLVLEYMD RGSLADVIRQ VKTILEPYLA VVCKQVLLGL VYLHNERHVI HRDIKPSNLL
201: VNHKGEVKIS DFGVSASLAS SMGQRDTFVG TYNYMSPERI SGSTYDYSSD IWSLGMSVLE CAIGRFPYLE SEDQQNPPSF YELLAAIVEN PPPTAPSDQF
301: SPEFCSFVSA CIQKDPPARA SSLDLLSHPF IKKFEDKDID LGILVGTLEP PVNYLR

Arabidopsis Description

MKK6Mitogen-activated protein kinase kinase 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJV0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.