Factsheet for Bra006866.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 4
mitochondrion 3
nucleus 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	plastid
EpiLoc:	cytosol
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	nucleus
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra000214.1-P
Bra000326.1-P
Bra000955.1-P
Bra004784.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G56580.1	Bra000214.1-P	AT2G41100.1	17360592
AT5G56580.1	Bra000326.1-P	AT2G43790.1	19513235
AT5G56580.1	Bra004784.1-P	AT2G43790.1	19513235
AT5G56580.1	Bra000955.1-P	AT4G01370.1	19513235

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX88578	Canola	cytosol	95.4	92.74
CDY11913	Canola	cytosol	94.25	91.62
AT5G56580.1	Thale cress	cytosol	91.38	89.33
Bra002806.1-P	Field mustard	cytosol	91.09	89.04
KRH72031	Soybean	cytosol	81.9	80.51
KRH33212	Soybean	cytosol	81.9	80.06
Solyc03g119490.2.1	Tomato	cytosol, extracellular	80.17	78.81
PGSC0003DMT400014637	Potato	cytosol	80.17	78.81
VIT_11s0016g02970.t01	Wine grape	cytosol	79.31	77.97
GSMUA_Achr9P00100_001	Banana	extracellular, vacuole	62.93	70.42
Zm00001d043609_P001	Maize	cytosol, extracellular	68.97	67.61
EES03540	Sorghum	cytosol	68.39	67.04
TraesCS4B01G315300.1	Wheat	cytosol	68.1	66.76
Os01t0510100-01	Rice	cytosol, plasma membrane	68.1	66.76
TraesCS4D01G312300.3	Wheat	cytosol	67.82	66.48
TraesCS4A01G414600.1	Wheat	cytosol	67.82	66.48
Bra011137.1-P	Field mustard	cytosol	55.46	53.02
Bra019122.1-P	Field mustard	cytosol	52.3	51.27
Bra003842.1-P	Field mustard	mitochondrion	33.62	37.99
Bra008099.1-P	Field mustard	mitochondrion	33.05	37.58
Bra001818.1-P	Field mustard	plastid	35.06	36.97
Bra023894.1-P	Field mustard	cytosol, plastid	34.2	35.95
Bra020769.1-P	Field mustard	plastid	31.61	35.71
Bra030430.1-P	Field mustard	cytosol, plastid	33.91	35.01
Bra014295.1-P	Field mustard	cytosol, plastid	33.91	33.24
Bra023257.1-P	Field mustard	cytosol, mitochondrion, nucleus, plasma membrane, plastid	27.87	31.49
Bra001817.1-P	Field mustard	cytosol	33.91	31.13
Bra006265.1-P	Field mustard	cytosol	16.67	30.21
Bra025576.1-P	Field mustard	cytosol	38.22	25.68
Bra039858.1-P	Field mustard	cytosol	23.28	16.77
Bra016220.1-P	Field mustard	cytosol	25.86	15.2
Bra007914.1-P	Field mustard	cytosol	25.57	14.59
Bra035282.1-P	Field mustard	cytosol	24.71	14.53
Bra008742.1-P	Field mustard	cytosol	25.57	14.19
Bra035132.1-P	Field mustard	cytosol	24.14	14.14
Bra023483.1-P	Field mustard	cytosol	25.57	14.13
Bra027269.1-P	Field mustard	cytosol	25.57	13.11
Bra033169.1-P	Field mustard	cytosol	23.85	12.59
Bra003600.1-P	Field mustard	cytosol	22.13	12.11
Bra013762.1-P	Field mustard	mitochondrion	22.99	11.73
Bra004366.1-P	Field mustard	cytosol	28.74	11.63
Bra038106.1-P	Field mustard	plastid	25.57	10.7

Protein Annotations

Gene3D:1.10.510.10	MapMan:13.4.4.1.3	MapMan:18.4.2.1	Gene3D:3.30.200.20	EnsemblPlantsGene:Bra006866	EnsemblPlants:Bra006866.1
EnsemblPlants:Bra006866.1-P	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674
GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
UniProt:M4CRM5	PFAM:PF00069	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR24361	PANTHER:PTHR24361:SF616	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	UniParc:UPI000253FD86	SEG:seg	:	:	:

Description

AT5G56580 (E=6e-166) ATMKK6, ANQ1, MKK6 | MKK6 (MAP KINASE KINASE 6); MAP kinase kinase/ kinase

Coordinates

chrA03:+:5405408..5407159

Molecular Weight (calculated)

38660.1 Da

IEP (calculated)

6.046

GRAVY (calculated)

-0.194

Length

348 amino acids

Sequence
(BLAST)

001: MAPMKLKSNL KQLKLSVPAQ ETPISSFLTA SGTFHDGDFL LNQKGRRLIS DEKQSTPSDS KELDFEITAE DLETVKVIGK GSGGVVQLVR HKWAGKLFAM
101: KVIQMNIQEE IRKQIVQELK INQASSQCPH VVVCYHSFYH NGAFSLVLEY MDRGSLADVI RQVKTILEPY LAVVCKQVLQ GLVYLHNERH VIHRDIKPSN
201: LLVNHKGEVK ISDFGVSASL ASSMGQRDTF VGTYNYMSPE RISGSAYDYS SDIWSLGMSV LECAIGRFPY LESEDQQNPP SFYELLAAIV ENPPPTAPSD
301: QFSPEFCSFV SACIQKDPPA RASSLDLLVN NSYSPLSFSS LGNNLEDL

Best Arabidopsis Sequence Match ( AT5G56580.1 )
(BLAST)

001: MVKIKSNLKQ LKLSVPAQES PISSFLTASG TFHDGDFLLN QKGLRLTSDE KQSRQSDSKE LDFEITAEDL ETVKVIGKGS GGVVQLVRHK WVGKFFAMKV
101: IQMNIQEEIR KQIVQELKIN QASSQCPHVV VCYHSFYHNG AFSLVLEYMD RGSLADVIRQ VKTILEPYLA VVCKQVLLGL VYLHNERHVI HRDIKPSNLL
201: VNHKGEVKIS DFGVSASLAS SMGQRDTFVG TYNYMSPERI SGSTYDYSSD IWSLGMSVLE CAIGRFPYLE SEDQQNPPSF YELLAAIVEN PPPTAPSDQF
301: SPEFCSFVSA CIQKDPPARA SSLDLLSHPF IKKFEDKDID LGILVGTLEP PVNYLR

Arabidopsis Description

MKK6Mitogen-activated protein kinase kinase 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJV0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.