Factsheet for Bra004366.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX95954	Canola	cytosol	86.63	96.13
AT1G69220.1	Thale cress	cytosol	76.16	78.35
VIT_01s0011g00300.t01	Wine grape	cytosol	59.19	61.25
KRH75082	Soybean	cytosol	56.16	60.75
KRH70943	Soybean	cytosol	58.49	60.24
Solyc05g012130.2.1	Tomato	cytosol	56.51	59.49
GSMUA_Achr7P00480_001	Banana	cytosol	49.88	52.9
Os03t0755000-01	Rice	cytosol, mitochondrion, plastid	49.77	51.01
TraesCS5A01G392500.1	Wheat	cytosol	48.49	50.55
TraesCS5D01G402300.1	Wheat	cytosol	48.26	50.49
HORVU5Hr1G095970.2	Barley	cytosol	48.37	49.76
Zm00001d034055_P001	Maize	cytosol	49.07	49.47
OQU90965	Sorghum	cytosol	49.07	49.36
TraesCS5B01G397300.1	Wheat	cytosol	48.6	48.72
Bra006265.1-P	Field mustard	cytosol	8.02	35.94
Bra008099.1-P	Field mustard	mitochondrion	11.98	33.66
Bra003842.1-P	Field mustard	mitochondrion	11.98	33.44
Bra020769.1-P	Field mustard	plastid	11.05	30.84
Bra030430.1-P	Field mustard	cytosol, plastid	11.86	30.27
Bra023894.1-P	Field mustard	cytosol, plastid	11.51	29.91
Bra014295.1-P	Field mustard	cytosol, plastid	12.33	29.86
Bra019122.1-P	Field mustard	cytosol	12.21	29.58
Bra001818.1-P	Field mustard	plastid	11.28	29.39
Bra002806.1-P	Field mustard	cytosol	12.09	29.21
Bra006866.1-P	Field mustard	cytosol	11.63	28.74
Bra023257.1-P	Field mustard	cytosol, mitochondrion, nucleus, plasma membrane, plastid	10.23	28.57
Bra011137.1-P	Field mustard	cytosol	12.09	28.57
Bra027269.1-P	Field mustard	cytosol	21.28	26.95
Bra001817.1-P	Field mustard	cytosol	11.28	25.59
Bra039858.1-P	Field mustard	cytosol	13.26	23.6
Bra007914.1-P	Field mustard	cytosol	15.7	22.13
Bra016220.1-P	Field mustard	cytosol	15.23	22.13
Bra035282.1-P	Field mustard	cytosol	14.88	21.62
Bra038106.1-P	Field mustard	plastid	20.47	21.15
Bra008742.1-P	Field mustard	cytosol	15.35	21.05
Bra035132.1-P	Field mustard	cytosol	14.53	21.04
Bra033169.1-P	Field mustard	cytosol	16.05	20.94
Bra023483.1-P	Field mustard	cytosol	15.0	20.48
Bra013762.1-P	Field mustard	mitochondrion	16.16	20.38
Bra025576.1-P	Field mustard	cytosol	11.63	19.3
Bra003600.1-P	Field mustard	cytosol	13.49	18.24

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.2.3	Gene3D:3.30.200.20	EnsemblPlantsGene:Bra004366	EnsemblPlants:Bra004366.1	EnsemblPlants:Bra004366.1-P
GO:GO:0000166	GO:GO:0000775	GO:GO:0001558	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0005694	GO:GO:0005737	GO:GO:0005739	GO:GO:0005768	GO:GO:0005769	GO:GO:0005794
GO:GO:0005802	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016020	GO:GO:0016043	GO:GO:0016049	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	GO:GO:0040007	GO:GO:0042127	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M4CJI2
PFAM:PF00069	ScanProsite:PS00107	PFscan:PS50011	PANTHER:PTHR24361	PANTHER:PTHR24361:SF413	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	UniParc:UPI0002541832	SEG:seg	:

Description

AT1G69220 (E=4e-175) SIK1 | SIK1; ATP binding / kinase/ protein kinase/ protein serine/threonine kinase

Coordinates

chrA07:-:18260464..18266226

Molecular Weight (calculated)

95170.1 Da

IEP (calculated)

5.543

GRAVY (calculated)

-0.655

Length

860 amino acids

Sequence
(BLAST)

001: MDHNSPRSRR SRKPDPTPDL YSTFVVHSDS DSDQRRDRDK PDEDETVDLY ATMVYKSDSD GEGDEDEDST LPPLLKRLPK DFGGGGASYD EDDDDGDFGT
101: MIVKKDSKNS PGDEESSSDE EEGEYGTFVV VKPSSSKKGK ETDLSTMGRA VASMQESSFG GKNNRKSTPS LQQRSSKMST TSLPDCVRED PTTKYEFLNE
201: LGKGSYGSVY KARDLKTSEI VAIKVISLTE GEEGYEEIRG EIEMLQQCNH PNVVRYLGSF QGDDYLWIVM EYCGGGSVTD LMNVTEEALE EYQIAYICRE
301: ALKGLAYLHS IFKVHRDIKG GNILLTEQGE VKLGDFGVAA QLTRTMSKRN TFIGTPHWMA PEVIQENRYD GKVDVWALGV SAIEMAEGLP PRSAVHPMRV
401: LFMISIEPAP MLEDKEKWSL VFHDFVAKCL TKEPRLRPTA DEMLKHKFVQ RCKMGASAMS PKIEKSRQIR ASMALQAQNV VASSEDTSTL GPKSSDEMGI
501: TVPYKHPNNG YQNTTEAPPS GDFGTMIVHG EDETEESYSG AQLAKEKESS PSQVDGVFVG FSGDEVAGSW IHDKKKLPAT DVPVDKSTSQ SVRGTPPSVS
601: ISLEHKTKLN SISGTQTEGG SDASGVTLKS ETVGKKAFAL QDKLWSIYAA GNTVPIPFLR ATDISPIALL SENMIGGMQQ DGNRTVAVEA LQELFTSDPQ
701: SKKGRRGQNE MPLPPSVYQR LTSSPPLMNL AQVLAYHRAC YEEMPLQEMQ ATQEQQTIQN LYHLQGQRGC CKLQRTCIDS RRCRSSKLQQ GNKLKESSKE
801: CSVLLGVCSC TAESEICIWK IADVREHRDP ASKGRPLSRK QKDLRFKLPS SVHRKLSTRT

Best Arabidopsis Sequence Match ( AT1G69220.1 )
(BLAST)

001: MDHNSPKSRR SRKPEPKPDI YSTFVVHSDS DSDQGRDRDK RKAKPEEDEN VDLYATMVYK GDSDGEGEED DDDDSMLPPL LKRLPKDFGG GASLDYDDDD
101: GDESGDFGTM IVKTDRSSHS KKNSPYSSKP RMGVSPRRRA RGGDEESSDE EDEEEDDDDD DGDYGTFVVK SKDKKGKKKD KEIDMTTMGR AVASMQKSNF
201: GGKTRKLDPS SSSSKLHGED NRKMQQQNSK MSTTSLPDSI TREDPTTKYE FLNELGKGSY GSVYKARDLK TSEIVAVKVI SLTEGEEGYE EIRGEIEMLQ
301: QCNHPNVVRY LGSYQGEDYL WIVMEYCGGG SVADLMNVTE EALEEYQIAY ICREALKGLA YLHSIYKVHR DIKGGNILLT EQGEVKLGDF GVAAQLTRTM
401: SKRNTFIGTP HWMAPEVIQE NRYDGKVDVW ALGVSAIEMA EGLPPRSSVH PMRVLFMISI EPAPMLEDKE KWSLVFHDFV AKCLTKEPRL RPTAAEMLKH
501: KFVERCKTGA SAMSPKIEKS RQIRATMALQ AQSVVAPSLE DTSTLGPKSS EELGITVPSK PPQNSTEAPL TSTLNRQHIT GNTVLAGEGG DFGTMIVHGE
601: DETEESDSRS QLVREKESSS SQFEGVPREF PGEELPDSWI HDKKKPPAID LPVEASISQS MQASSSHEHR TKLHNIAGTQ MEGGSDASGS TLKNETVGRK
701: AFALQDKLWS IYAAGNTVPI PFLRATDISP IALLSENMIG GMQQDGNGTV AVEALQELFT SSDPQSKKGR RGQNEMPLPP SVYQRLTTSS SLMNLAQVLA
801: YHRACYEEMP LQELQATQEQ QTIQNLCDTL RTILRL

Arabidopsis Description

SIK1Protein kinase superfamily protein [Source:UniProtKB/TrEMBL;Acc:O24527]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.