CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d034055_P001	Maize	cytosol	94.27	94.49
Os03t0755000-01	Rice	cytosol, mitochondrion, plastid	83.98	85.58
TraesCS5D01G402300.1	Wheat	cytosol	80.82	84.06
TraesCS5A01G392500.1	Wheat	cytosol	80.7	83.64
HORVU5Hr1G095970.2	Barley	cytosol	81.05	82.89
TraesCS5B01G397300.1	Wheat	cytosol	80.82	80.54
GSMUA_Achr7P00480_001	Banana	cytosol	62.11	65.47
KRH75082	Soybean	cytosol	51.93	55.85
VIT_01s0011g00300.t01	Wine grape	cytosol	54.04	55.6
CDX95954	Canola	cytosol	49.47	54.58
CDY54149	Canola	cytosol	50.41	54.49
Solyc05g012130.2.1	Tomato	cytosol	51.81	54.22
KRH70943	Soybean	cytosol	52.63	53.89
AT1G69220.1	Thale cress	cytosol	51.81	52.99
CDY50304	Canola	cytosol	50.18	52.96
Bra004366.1-P	Field mustard	cytosol	49.36	49.07
EER92617	Sorghum	mitochondrion	12.05	30.56
EES03540	Sorghum	cytosol	11.58	27.89
OQU75818	Sorghum	cytosol	11.11	27.22
OQU91108	Sorghum	cytosol	10.29	26.99
KXG19514	Sorghum	plastid	10.88	26.8
EER93571	Sorghum	mitochondrion	10.53	26.79
OQU85840	Sorghum	plastid	11.46	26.34
EER99430	Sorghum	cytosol	19.88	24.67
KXG30961	Sorghum	mitochondrion	10.29	24.18
KXG27789	Sorghum	cytosol	8.65	23.57
KXG29620	Sorghum	mitochondrion	14.5	23.18
KXG32862	Sorghum	cytosol	8.3	23.13
OQU83236	Sorghum	cytosol	3.39	22.83
OQU88009	Sorghum	cytosol	8.54	22.81
EER98773	Sorghum	plastid	8.65	21.89
KXG22814	Sorghum	cytosol, mitochondrion, peroxisome, plastid	14.04	20.55
OQU76383	Sorghum	cytosol, nucleus, plasma membrane	15.67	19.23
EES05936	Sorghum	cytosol	14.85	18.46
KXG38178	Sorghum	cytosol	15.67	18.18
KXG24971	Sorghum	cytosol	11.11	18.16
KXG40349	Sorghum	mitochondrion	15.79	17.69

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.2.3	Gene3D:3.30.200.20	EntrezGene:8086227	ProteinID:AAM47579.1	GO:GO:0000166
GO:GO:0000775	GO:GO:0001558	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0005694	GO:GO:0005737	GO:GO:0005739	GO:GO:0005768	GO:GO:0005769
GO:GO:0005794	GO:GO:0005802	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0006950
GO:GO:0007049	GO:GO:0007154	GO:GO:0007165	GO:GO:0007266	GO:GO:0007346	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016043	GO:GO:0016049	GO:GO:0016301
GO:GO:0016310	GO:GO:0016477	GO:GO:0016740	GO:GO:0019538	GO:GO:0023014	GO:GO:0030036
GO:GO:0031098	GO:GO:0032147	GO:GO:0040007	GO:GO:0042127	GO:GO:0043408	GO:GO:0048365
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	EnsemblPlants:OQU90965	ProteinID:OQU90965	ProteinID:OQU90965.1	PFAM:PF00069
ScanProsite:PS00107	PFscan:PS50011	PANTHER:PTHR24361	PANTHER:PTHR24361:SF413	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
UniProt:Q8LKU7	SMART:SM00220	EnsemblPlantsGene:SORBI_3001G085700	SUPFAM:SSF56112	UniParc:UPI00000A6C5C	RefSeq:XP_002466436.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:-:6624642..6640434

Molecular Weight (calculated)

93653.2 Da

IEP (calculated)

5.556

GRAVY (calculated)

-0.607

Length

855 amino acids

Sequence
(BLAST)

001: MAFSPRSPWS RPKRNDVYST FVVHGDDDED DARGSRRGRG PSTRAEEDEE EDPSSLPPLL QRLPKDFGGP SFDEDEDAYS SDPDDASLSA TVVFKSGAPA
101: SARSPFLDLR RSSPRATDDD PYSTFVVHST ARSGGTSSSP RGSASGTFIR RSGGSSSPHE SVSGTFIRRT STPSSPRDSV SGTFIRRPGS PSSPRGSFSG
201: TFIRHTSGGS SSYESASGGG GGFGSSFWSP AVEQTEELRQ PSPLMQQQQQ QHSRRKPSVS SAPDSVTRED PSTKYELLHE LGKGSYGAVY KARDLRTQEL
301: VAVKIISLTE GEEGYEDIRG EIEMLQQCSH PNVVRYFGSY QGEDYLWIVM EYCGGGSVAD LIGITEEPLD ESQIAYICRE ALKGLAYLHS IFKVHRDIKG
401: GNILLTEQGE VKLGDFGVAA QLTRTMSKRN TFIGTPHWMA PEVIQESRYD GKVDVWALGV SAIEMAEGMP PRSTVHPMRV IFMISSEPAP MLEDKEKWSL
501: LFHDFIAKCL TKDPRLRPAA SEMVKHKFIE KCNSGASKML AKIKEAKKIR ATLAVQNELS DPDNTMQDVP VRINEDYGET VPTNSQQHMN HGTYNDCQAG
601: DFGTMIVHTE DGDEVAESPI FPRTEFIPGL GSINSFTHDP KRAELISSFW AENTGDSDAN KDRDLDDRPD IQESKAIPPL TGTVKKHIGA EGTIRRHDNQ
701: VNLSPGFANT TKLNSSPSRK AFSVQDKLWS IYAAGNTVPI PFLKAIDISP LALVSENEAG NGLAGSSTND ALEAVRELFS GDGQAKKGRK GQNEVPLPPG
801: VHHRLMTSPT LMNLAQALAY HKTCYEDMPL QDSQATQEQQ TIQNLCDTLR TILRL

Best Arabidopsis Sequence Match ( AT1G69220.1 )
(BLAST)

001: MDHNSPKSRR SRKPEPKPDI YSTFVVHSDS DSDQGRDRDK RKAKPEEDEN VDLYATMVYK GDSDGEGEED DDDDSMLPPL LKRLPKDFGG GASLDYDDDD
101: GDESGDFGTM IVKTDRSSHS KKNSPYSSKP RMGVSPRRRA RGGDEESSDE EDEEEDDDDD DGDYGTFVVK SKDKKGKKKD KEIDMTTMGR AVASMQKSNF
201: GGKTRKLDPS SSSSKLHGED NRKMQQQNSK MSTTSLPDSI TREDPTTKYE FLNELGKGSY GSVYKARDLK TSEIVAVKVI SLTEGEEGYE EIRGEIEMLQ
301: QCNHPNVVRY LGSYQGEDYL WIVMEYCGGG SVADLMNVTE EALEEYQIAY ICREALKGLA YLHSIYKVHR DIKGGNILLT EQGEVKLGDF GVAAQLTRTM
401: SKRNTFIGTP HWMAPEVIQE NRYDGKVDVW ALGVSAIEMA EGLPPRSSVH PMRVLFMISI EPAPMLEDKE KWSLVFHDFV AKCLTKEPRL RPTAAEMLKH
501: KFVERCKTGA SAMSPKIEKS RQIRATMALQ AQSVVAPSLE DTSTLGPKSS EELGITVPSK PPQNSTEAPL TSTLNRQHIT GNTVLAGEGG DFGTMIVHGE
601: DETEESDSRS QLVREKESSS SQFEGVPREF PGEELPDSWI HDKKKPPAID LPVEASISQS MQASSSHEHR TKLHNIAGTQ MEGGSDASGS TLKNETVGRK
701: AFALQDKLWS IYAAGNTVPI PFLRATDISP IALLSENMIG GMQQDGNGTV AVEALQELFT SSDPQSKKGR RGQNEMPLPP SVYQRLTTSS SLMNLAQVLA
801: YHRACYEEMP LQELQATQEQ QTIQNLCDTL RTILRL

Arabidopsis Description

SIK1Protein kinase superfamily protein [Source:UniProtKB/TrEMBL;Acc:O24527]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.