CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 2
cytosol 1
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d053735_P002	Maize	cytosol	90.28	88.46
Os02t0179000-00	Rice	cytosol	57.01	73.49
HORVU6Hr1G029780.1	Barley	cytosol	71.4	71.4
TraesCS6D01G139200.1	Wheat	cytosol	67.66	71.12
TraesCS6B01G177800.1	Wheat	cytosol	71.4	70.48
TraesCS6A01G149900.1	Wheat	cytosol	71.4	70.35
EES05936	Sorghum	cytosol	45.42	35.32
OQU76383	Sorghum	cytosol, nucleus, plasma membrane	41.5	31.85
KXG38178	Sorghum	cytosol	41.31	29.99
KXG40349	Sorghum	mitochondrion	42.62	29.88
EES03540	Sorghum	cytosol	17.94	27.04
KXG22814	Sorghum	cytosol, mitochondrion, peroxisome, plastid	29.35	26.88
OQU83236	Sorghum	cytosol	6.36	26.77
OQU75818	Sorghum	cytosol	16.64	25.5
KXG19514	Sorghum	plastid	15.89	24.5
OQU91108	Sorghum	cytosol	14.21	23.31
KXG27789	Sorghum	cytosol	13.64	23.25
OQU88009	Sorghum	cytosol	13.64	22.81
KXG32862	Sorghum	cytosol	13.08	22.8
EER92617	Sorghum	mitochondrion	14.21	22.55
OQU85840	Sorghum	plastid	15.51	22.31
EER93571	Sorghum	mitochondrion	13.83	22.02
EER98773	Sorghum	plastid	13.83	21.89
KXG24971	Sorghum	cytosol	19.25	19.69
KXG30961	Sorghum	mitochondrion	13.27	19.51
EER99430	Sorghum	cytosol	24.49	19.01
OQU90965	Sorghum	cytosol	23.18	14.5

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.2.3	Gene3D:3.30.200.20	UniProt:A0A194YP53	ncoils:Coil	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	EnsemblPlants:KXG29620	ProteinID:KXG29620	ProteinID:KXG29620.1	InterPro:Kinase-like_dom_sf
PFAM:PF00069	PIRSF:PIRSF000615	ScanProsite:PS00107	PFscan:PS50011	PANTHER:PTHR24361	PANTHER:PTHR24361:SF366
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	EnsemblPlantsGene:SORBI_3004G064200	SUPFAM:SSF56112	UniParc:UPI0007F20288

Description

hypothetical protein

Coordinates

chr4:+:5183488..5188710

Molecular Weight (calculated)

60199.1 Da

IEP (calculated)

7.389

GRAVY (calculated)

-0.509

Length

535 amino acids

Sequence
(BLAST)

001: MWTKGKKSGV LAPRGIIRKR EFPIRAADYE LLEPVGDGAT AVVRRARCLP LGGEVVAVKI MNMAHRTESD VNNASEEVKT MIMINHPNLL SAYCSFTEGE
101: ALWIVMPYMA GGSCYHLMKS SYPKGFDDEN FIAFVLRETL KGLEYLHENG HIHRDVKAGN ILLDQDKGVK LSDFGVTASL YDSIINRHGK RKTLVGTPCW
201: MAPEVMEQKD YDFKADIWSF GITALELAIG HAPFSSQPPA KVFLMTLQHA PPSLHNTKEK KFTDSFKSMI ATCLIKDPTK RPPAKKLLKH PFFKRAKSDH
301: NVVKCMLNKL PSLAERMQFI KENEALQADK KPLDNCKEKA SQEEYRRGVS EWNFDIADLK AQAALYPDEN EAEDFLRFLF ELDIVDETTQ LKDIRAQSHS
401: INDDKMNVGD DGSGKSNSTS PMSLSQSVKQ LDKGSPNDLV RSESFEIHSI SPAKQLTRAV STCKDVDEYL EKTAFQKGRF KVIHDYSKIE GATPREKELL
501: ERISSLEQML LATQDEVERL KAKESKGAEG CSQQQ

Best Arabidopsis Sequence Match ( AT1G79640.3 )
(BLAST)

001: MEKKKYPIGP EHYTLYEFIG QGVSALVHRA LCIPFDEVVA IKILDFERDN CDLNNISREA QTMMLVDHPN VLKSHCSFVS DHNLWVIMPY MSGGSCLHIL
101: KAAYPDGFEE AIIATILREA LKGLDYLHQH GHIHRDVKAG NILLGARGAV KLGDFGVSAC LFDSGDRQRT RNTFVGTPCW MAPEVMEQLH GYDFKADIWS
201: FGITGLELAH GHAPFSKYPP MKVLLMTLQN APPGLDYERD KKFSRSFKQM IASCLVKDPS KRPSAKKLLK HSFFKQARSS DYIARKLLDG LPDLVNRVQA
301: IKRKEEDMLA QEKMADGEKE ELSQNEYKRG ISGWNFNLDD MKAQASLIQD MDCGFSDSLS GSATSLQALD SQDTQSEIQE DTGQITNKYL QPLIHRSLSI
401: ARDKSDDDSS LASPSYDSYV YSSPRHEDLS LNNTHVGSTH ANNGKPTDAT SIPTNQPTEI IAGSSVLADG NGAPNKGESD KTQEQLQNGS NCNGTHPTVG
501: GDDVPTEMAV KPPKAASSLD ESDDKSKPPV VQQRGRFKVT SENLDIEKVV APSPILQKSH SMQVLCQHSS ASLPHSDVTL PNLTSSYVYP LVYPVLQTNI
601: LERDNILHMM KVLTNRELTD GRAVEQGSIQ QPTVPPTEKS MLEAAHEREK ELLHDITDLQ WRLICAEEEL QKYKTEHAQV

Arabidopsis Description

Protein kinase superfamily protein [Source:TAIR;Acc:AT1G79640]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.