CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 4
cytosol 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER98773	Sorghum	plastid	83.12	78.7
Zm00001d043672_P001	Maize	cytosol, plastid	79.69	76.58
KXG32862	Sorghum	cytosol	51.88	54.07
KXG27789	Sorghum	cytosol	52.81	53.82
OQU91108	Sorghum	cytosol	44.38	43.56
EER93571	Sorghum	mitochondrion	43.75	41.67
EER92617	Sorghum	mitochondrion	40.31	38.28
OQU83236	Sorghum	cytosol	14.38	36.22
KXG30961	Sorghum	mitochondrion	35.31	31.04
KXG19514	Sorghum	plastid	31.56	29.11
OQU75818	Sorghum	cytosol	30.94	28.37
EES03540	Sorghum	cytosol	29.38	26.48
OQU85840	Sorghum	plastid	29.69	25.54
KXG24971	Sorghum	cytosol	27.5	16.83
KXG22814	Sorghum	cytosol, mitochondrion, peroxisome, plastid	25.62	14.04
KXG29620	Sorghum	mitochondrion	22.81	13.64
EES05936	Sorghum	cytosol	22.81	10.61
OQU76383	Sorghum	cytosol, nucleus, plasma membrane	22.81	10.47
EER99430	Sorghum	cytosol	22.19	10.3
KXG38178	Sorghum	cytosol	22.81	9.91
KXG40349	Sorghum	mitochondrion	23.44	9.83
OQU90965	Sorghum	cytosol	22.81	8.54

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.2.1	EntrezGene:8062456	UniProt:A0A1W0W0U7	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	EnsemblPlants:OQU88009	ProteinID:OQU88009	ProteinID:OQU88009.1	PFAM:PF00069
ScanProsite:PS00107	PFscan:PS50011	PANTHER:PTHR24361	PANTHER:PTHR24361:SF493	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SMART:SM00220	EnsemblPlantsGene:SORBI_3003G383100	SUPFAM:SSF56112	UniParc:UPI0001A853DE	RefSeq:XP_002458894.1	SEG:seg

Description

hypothetical protein

Coordinates

chr3:-:69632952..69634646

Molecular Weight (calculated)

34318.9 Da

IEP (calculated)

8.392

GRAVY (calculated)

0.070

Length

320 amino acids

Sequence
(BLAST)

001: MACSVIPMMM PDEMFRRRVS AAPPHQLKMT ASVPVAAPAP APEELRLSDL DWIGDLGKGG FARVCKARHC RTGAVFALKL SFDPDPLVVE LEAEVLRRAA
101: GAPHVIDFHA LLRGPGGKAA FVLEYMDAGS LGDLLRRRRR VGIPEAAVAE VAAHCVVALA QLHSRGVAHL DVKPDNLLAN TRGEIKISDF NLSRILYGGS
201: GERLQVPITG GTLMYLSPER FAPNARAGPH AAMAADVWSL GVTVLELFLG RLSLLPGVQK PSAEEVKQAI CDGKPPSVPE DAEASAELRG FVAACVQKEP
301: ARRATVAQLL SHPFVVRRDM

Best Arabidopsis Sequence Match ( AT1G18350.1 )
(BLAST)

001: MALVRKRRQI NLRLPVPPLS VHLPWFSFAS STAPVINNGI SASDVEKLHV LGRGSSGIVY KVHHKTTGEI YALKSVNGDM SPAFTRQLAR EMEILRRTDS
101: PYVVRCQGIF EKPIVGEVSI LMEYMDGGNL ESLRGAVTEK QLAGFSRQIL KGLSYLHSLK IVHRDIKPAN LLLNSRNEVK IADFGVSKII TRSLDYCNSY
201: VGTCAYMSPE RFDSAAGENS DVYAGDIWSF GVMILELFVG HFPLLPQGQR PDWATLMCVV CFGEPPRAPE GCSDEFRSFV DCCLRKESSE RWTASQLLGH
301: PFLRESL

Arabidopsis Description

MKK7MKK7 [Source:UniProtKB/TrEMBL;Acc:A0A178W604]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.