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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
EER89222
EER94589
EES01631
EES09201
EES16322
OQU78227

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G56580.1 EES01631 AT2G41100.1 17360592
AT5G56580.1 EES09201 AT2G41100.1 17360592
AT5G56580.1 EES16322 AT2G41100.1 17360592
AT5G56580.1 OQU78227 AT2G41100.1 17360592
AT5G56580.1 EER89222 AT2G43790.1 19513235
AT5G56580.1 EER94589 AT4G01370.1 19513235
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d043609_P001 Maize cytosol, extracellular 95.77 95.77
TraesCS4B01G315300.1 Wheat cytosol 93.52 93.52
Os01t0510100-01 Rice cytosol, plasma membrane 93.52 93.52
TraesCS4D01G312300.3 Wheat cytosol 93.24 93.24
TraesCS4A01G414600.1 Wheat cytosol 93.24 93.24
GSMUA_Achr9P00100_001 Banana extracellular, vacuole 68.73 78.46
PGSC0003DMT400014637 Potato cytosol 77.46 77.68
Solyc03g119490.2.1 Tomato cytosol, extracellular 76.9 77.12
VIT_11s0016g02970.t01 Wine grape cytosol 76.34 76.55
KRH72031 Soybean cytosol 76.06 76.27
KRH33212 Soybean cytosol 76.34 76.12
AT5G56580.1 Thale cress cytosol 70.99 70.79
CDX88578 Canola cytosol 71.27 70.67
CDY11913 Canola cytosol 71.27 70.67
Bra002806.1-P Field mustard cytosol 70.14 69.94
CDY32868 Canola cytosol 49.86 69.14
CDY64969 Canola cytosol 64.79 69.07
Bra006866.1-P Field mustard cytosol 67.04 68.39
CDY39283 Canola plasma membrane, vacuole 61.13 61.47
OQU75818 Sorghum cytosol 59.15 60.17
OQU83236 Sorghum cytosol 14.08 39.37
KXG19514 Sorghum plastid 35.77 36.6
EER93571 Sorghum mitochondrion 31.83 33.63
OQU85840 Sorghum plastid 35.21 33.6
OQU91108 Sorghum cytosol 29.86 32.52
EER92617 Sorghum mitochondrion 30.42 32.05
KXG27789 Sorghum cytosol 27.89 31.53
KXG32862 Sorghum cytosol 27.04 31.27
OQU88009 Sorghum cytosol 26.48 29.38
EER98773 Sorghum plastid 25.92 27.22
KXG30961 Sorghum mitochondrion 27.89 27.2
KXG24971 Sorghum cytosol 38.31 26.0
KXG29620 Sorghum mitochondrion 27.04 17.94
KXG22814 Sorghum cytosol, mitochondrion, peroxisome, plastid 25.35 15.41
OQU76383 Sorghum cytosol, nucleus, plasma membrane 27.32 13.92
EES05936 Sorghum cytosol 26.76 13.81
EER99430 Sorghum cytosol 26.76 13.79
KXG40349 Sorghum mitochondrion 26.2 12.19
KXG38178 Sorghum cytosol 24.51 11.8
OQU90965 Sorghum cytosol 27.89 11.58
Protein Annotations
Gene3D:1.10.510.10MapMan:13.4.4.1.3MapMan:18.4.2.1Gene3D:3.30.200.20EntrezGene:8059201UniProt:C5XIE1
EnsemblPlants:EES03540ProteinID:EES03540ProteinID:EES03540.1GO:GO:0000003GO:GO:0000165GO:GO:0000166
GO:GO:0000187GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0004674GO:GO:0004708
GO:GO:0004871GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005737GO:GO:0006464GO:GO:0006468GO:GO:0006950GO:GO:0007049GO:GO:0007112
GO:GO:0007154GO:GO:0007165GO:GO:0007275GO:GO:0007346GO:GO:0008150GO:GO:0008152
GO:GO:0009524GO:GO:0009653GO:GO:0009791GO:GO:0009987GO:GO:0010311GO:GO:0016043
GO:GO:0016301GO:GO:0016740GO:GO:0019538GO:GO:0023014GO:GO:0031098GO:GO:0032147
InterPro:IPR000719InterPro:Kinase-like_dom_sfPFAM:PF00069PIRSF:PIRSF000654ScanProsite:PS00107ScanProsite:PS00108
PFscan:PS50011PANTHER:PTHR24361PANTHER:PTHR24361:SF616InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220
EnsemblPlantsGene:SORBI_3003G280300SUPFAM:SSF56112unigene:Sbi.538InterPro:Ser/Thr_kinase_ASUniParc:UPI0001A84D02RefSeq:XP_002458420.1
Description
hypothetical protein
Coordinates
chr3:-:61551596..61556665
Molecular Weight (calculated)
39981.3 Da
IEP (calculated)
5.450
GRAVY (calculated)
-0.194
Length
355 amino acids
Sequence
(BLAST)
001: MRGKKPLKDL RLSVPAQETP VDKFLTASGT FKDGELRLNQ SGLRLISEEN GGEDESTKLK VEDVQLSMDD LEMIQVIGKG SGGIVQLVRH KWVGTLYALK
101: GIQMNIQESV RKQIVQELKI NQATQCPHIV MCHQSFYHNG VIYLVLEYMD RGSLADIVKQ VKTVLEPYLA VLCKQVLEGL LYLHHERHVI HRDIKPSNLL
201: VNRKGEVKIT DFGVSAVLAS SIGQRDTFVG TYNYMAPERI SGSSYDYKSD IWSLGLVILE CAIGRFPYIP SEGEGWLSFY ELLEAIVDQP PPSAPADQFS
301: PEFCSFISSC IQKDPAQRMS ASELLNHPFL KKFEDKDLDL RILVEDLEPP MNIPE
Best Arabidopsis Sequence Match ( AT5G56580.1 )
(BLAST)
001: MVKIKSNLKQ LKLSVPAQES PISSFLTASG TFHDGDFLLN QKGLRLTSDE KQSRQSDSKE LDFEITAEDL ETVKVIGKGS GGVVQLVRHK WVGKFFAMKV
101: IQMNIQEEIR KQIVQELKIN QASSQCPHVV VCYHSFYHNG AFSLVLEYMD RGSLADVIRQ VKTILEPYLA VVCKQVLLGL VYLHNERHVI HRDIKPSNLL
201: VNHKGEVKIS DFGVSASLAS SMGQRDTFVG TYNYMSPERI SGSTYDYSSD IWSLGMSVLE CAIGRFPYLE SEDQQNPPSF YELLAAIVEN PPPTAPSDQF
301: SPEFCSFVSA CIQKDPPARA SSLDLLSHPF IKKFEDKDID LGILVGTLEP PVNYLR
Arabidopsis Description
MKK6Mitogen-activated protein kinase kinase 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJV0]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.