CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, nucleus, cytosol

Predictor Summary:

nucleus 3
cytosol 2
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d045967_P002	Maize	cytosol, nucleus, plasma membrane	78.48	90.26
CDY70105	Canola	cytosol	35.01	79.74
Os06t0486400-01	Rice	plasma membrane	78.62	79.08
TraesCS7B01G130700.1	Wheat	cytosol	77.19	76.86
TraesCS7A01G232300.1	Wheat	cytosol	76.33	76.0
HORVU7Hr1G047720.7	Barley	cytosol	75.9	75.36
CDX70576	Canola	cytosol	20.23	74.6
TraesCS7D01G232400.1	Wheat	cytosol	75.61	74.33
CDX78589	Canola	mitochondrion	23.67	73.01
Bra006265.1-P	Field mustard	cytosol	18.79	68.23
VIT_01s0127g00690.t01	Wine grape	cytosol	37.73	67.09
VIT_14s0066g01170.t01	Wine grape	cytosol	56.81	59.82
GSMUA_Achr4P24470_001	Banana	nucleus	60.11	59.6
Solyc02g086790.2.1	Tomato	cytosol	55.52	59.08
KRG93281	Soybean	cytosol	55.95	58.12
KRH56596	Soybean	cytosol	56.1	57.84
CDX85586	Canola	cytosol	52.37	56.07
CDX91026	Canola	cytosol	52.37	56.07
AT5G14720.1	Thale cress	cytosol, nucleus, plasma membrane	53.66	55.49
Bra023483.1-P	Field mustard	cytosol	49.07	54.29
CDY09880	Canola	cytosol	51.94	53.71
CDX69563	Canola	cytosol	51.65	53.49
Bra008742.1-P	Field mustard	cytosol	47.06	52.31
KXG29620	Sorghum	mitochondrion	31.85	41.5
EES05936	Sorghum	cytosol	40.75	41.28
KXG38178	Sorghum	cytosol	40.6	38.4
KXG40349	Sorghum	mitochondrion	40.46	36.96
KXG22814	Sorghum	cytosol, mitochondrion, peroxisome, plastid	26.83	32.02
OQU83236	Sorghum	cytosol	5.45	29.92
EES03540	Sorghum	cytosol	13.92	27.32
OQU75818	Sorghum	cytosol	13.06	26.07
KXG19514	Sorghum	plastid	12.63	25.36
OQU91108	Sorghum	cytosol	11.62	24.85
OQU85840	Sorghum	plastid	12.77	23.92
EER93571	Sorghum	mitochondrion	11.19	23.21
EER92617	Sorghum	mitochondrion	11.19	23.15
KXG27789	Sorghum	cytosol	10.33	22.93
OQU88009	Sorghum	cytosol	10.47	22.81
KXG32862	Sorghum	cytosol	10.04	22.8
EER99430	Sorghum	cytosol	22.53	22.79
KXG30961	Sorghum	mitochondrion	11.48	21.98
EER98773	Sorghum	plastid	10.47	21.6
KXG24971	Sorghum	cytosol	15.49	20.65
OQU90965	Sorghum	cytosol	19.23	15.67

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.2.3	Gene3D:3.30.200.20	UniProt:A0A1W0VSW7	ncoils:Coil	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016020	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	EnsemblPlants:OQU76383	ProteinID:OQU76383	ProteinID:OQU76383.1	PFAM:PF00069	ScanProsite:PS00107
PFscan:PS50011	PANTHER:PTHR24361	PANTHER:PTHR24361:SF488	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220
EnsemblPlantsGene:SORBI_3010G139600	SUPFAM:SSF56112	UniParc:UPI0001A89651	RefSeq:XP_002438374.1	:	:

Description

hypothetical protein

Coordinates

chr10:-:24374770..24413721

Molecular Weight (calculated)

78392.9 Da

IEP (calculated)

7.072

GRAVY (calculated)

-0.552

Length

697 amino acids

Sequence
(BLAST)

001: MEHALISRRF PTDPNEYKLY EEIGEGVSAT VYRALCVPVD ILVAIKVLDL EKCNNDLDGI RREVQTMSLI DHPNLLRAYC SFTNGHQLWV VMPYMAAGSA
101: LHIMKTSFPE GFDEPVIATL LREVLKALVY LHSEGHIHRD VKAGNILIDT NGAVKLADFG VSACMFDTGN RQRARNTFVG TPCWMAPEVM QQLHGYDYKA
201: DIWSFGITAL ELAHGHAPFS KYPPMKVLLM TLQNAPPGLD YERDKRFSKS FKDLVATCLV KDPRKRPPSE KLLKHSFFKH ARSAEYLARS ILDGLPPLGE
301: RFRELKCKEA ELLLNNKLGQ ESKEQLSQKE YIRGISGWNF NLEDLKNAAA LIDNLNGTCH LDVRENKVKD DSQDAYNGPG HIYQERLNHV ASRRPEEDEI
401: QEVEALNNAL SSSFPNHPLE ALKSCFDVCG ADDLDPTATD SRAQPSVRTL PFQQLQKMEH CKSANCNGES LERSLSVPKN LVTSGYHRHS SGSLIPEQVL
501: SPYSSSDLER DGFRQKNLSS RNRSGPLLFR QLKDSRTHQS VAPEESSEGN IIRRRGRFQV TSDSISQKVA TSACSSSSRI NLPIEAAQSN PKSPAILPTL
601: QFLMQQNTMQ KEVLSRLISS IEETSDDSLA RTSSSYQSSG GPAREKELHS YVLQLQRSVT ELAEEVQRLK LQNNQLEQQI NVLSRKDERS QTQDNRQ

Best Arabidopsis Sequence Match ( AT5G14720.1 )
(BLAST)

001: MESGSEKKFP LNAKDYKLYE EIGDGVSATV HRALCIPLNV VVAIKVLDLE KCNNDLDGIR REVQTMSLIN HPNVLQAHCS FTTGHQLWVV MPYMAGGSCL
101: HIIKSSYPDG FEEPVIATLL RETLKALVYL HAHGHIHRDV KAGNILLDSN GAVKLADFGV SACMFDTGDR QRSRNTFVGT PCWMAPEVMQ QLHGYDFKAD
201: VWSFGITALE LAHGHAPFSK YPPMKVLLMT LQNAPPGLDY ERDKRFSKAF KEMVGTCLVK DPKKRPTSEK LLKHPFFKHA RPADYLVKTI LNGLPPLGDR
301: YRQIKSKEAD LLMQNKSEYE AHLSQQEYIR GISAWNFNLE DLKTQAALIS DDDTSHAEEP DFNQKQCERQ DESALSPERA SSSATAPSQD DELNDIHDLE
401: SSFASFPIKP LQALKGCFDI SEDEDNATTP DWKDANVNSG QQLLTKASIG SLAETTKEED TAAQNTSLPR HVISEQKKYL SGSIIPESTF SPKRITSDAD
501: REFQQRRYQT ERSYSGSLYR TKRDSVDETS EVPHVEHKGR FKVTSADLSP KGSTNSTFTP FSGGTSSPSC LNATTASILP SIQSILQQNA MQREEILRLI
601: KYLEQTSAKQ PGSPETNVDD LLQTPPATSR ERELQSQVML LQQSFSSLTE ELKKQKQKNG QLENQLNALT HRND

Arabidopsis Description

Protein kinase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q84WU5]
SUBAcon: [plasma membrane,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.