Factsheet for GSMUA_Achr4P24470_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY70105	Canola	cytosol	35.56	81.7
CDX78589	Canola	mitochondrion	24.32	75.66
CDX70576	Canola	cytosol	20.2	75.13
Bra006265.1-P	Field mustard	cytosol	19.49	71.35
VIT_01s0127g00690.t01	Wine grape	cytosol	38.98	69.9
VIT_14s0066g01170.t01	Wine grape	cytosol	60.17	63.9
Os06t0486400-01	Rice	plasma membrane	62.02	62.91
Solyc02g086790.2.1	Tomato	cytosol	58.61	62.9
TraesCS7B01G130700.1	Wheat	cytosol	61.88	62.14
TraesCS7A01G232300.1	Wheat	cytosol	61.02	61.29
KRG93281	Soybean	cytosol	58.32	61.1
KRH56596	Soybean	cytosol	58.75	61.09
HORVU7Hr1G047720.7	Barley	cytosol	60.6	60.68
OQU76383	Sorghum	cytosol, nucleus, plasma membrane	59.6	60.11
TraesCS7D01G232400.1	Wheat	cytosol	60.46	59.94
AT5G14720.1	Thale cress	cytosol, nucleus, plasma membrane	57.04	59.5
Zm00001d045967_P002	Maize	cytosol, nucleus, plasma membrane	50.92	59.08
CDX85586	Canola	cytosol	54.62	58.99
CDX91026	Canola	cytosol	54.62	58.99
CDX69563	Canola	cytosol	55.62	58.1
CDY09880	Canola	cytosol	55.33	57.72
Bra023483.1-P	Field mustard	cytosol	51.07	56.98
Bra008742.1-P	Field mustard	cytosol	50.78	56.94
GSMUA_Achr8P11800_001	Banana	mitochondrion	34.42	56.15
GSMUA_Achr3P04830_001	Banana	cytosol	33.85	55.61
GSMUA_Achr9P13450_001	Banana	cytosol	36.98	45.38
GSMUA_Achr11P...	Banana	cytosol	40.83	38.32
GSMUA_Achr10P...	Banana	cytosol	43.1	38.26
GSMUA_Achr6P28000_001	Banana	cytosol	19.06	36.02
GSMUA_Achr9P00100_001	Banana	extracellular, vacuole	13.51	30.55
GSMUA_Achr9P22810_001	Banana	cytosol	5.12	28.12
GSMUA_Achr9P13590_001	Banana	mitochondrion	9.1	27.23
GSMUA_Achr4P05870_001	Banana	cytosol, mitochondrion, plasma membrane, plastid	12.52	26.51
GSMUA_Achr10P...	Banana	cytosol	12.94	26.07
GSMUA_Achr7P09660_001	Banana	cytosol	12.8	25.71
GSMUA_Achr8P16600_001	Banana	cytosol	9.53	25.67
GSMUA_Achr11P...	Banana	cytosol	10.38	25.35
GSMUA_Achr6P11270_001	Banana	cytosol	10.1	23.99
GSMUA_Achr10P...	Banana	plastid	13.51	22.46
GSMUA_Achr9P18710_001	Banana	cytosol	8.96	21.28
GSMUA_Achr4P23660_001	Banana	cytosol	21.34	20.19
GSMUA_Achr3P05000_001	Banana	plastid	12.8	19.82
GSMUA_Achr8P11810_001	Banana	nucleus	9.96	17.77
GSMUA_Achr7P00480_001	Banana	cytosol	18.78	16.28
GSMUA_Achr9P18700_001	Banana	cytosol	4.98	15.28

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.2.3	Gene3D:3.30.200.20	ncoils:Coil	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623
GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr4G24470_001	EnsemblPlants:GSMUA_Achr4P24470_001
EnsemblPlants:GSMUA_Achr4T24470_001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M0SRQ8	PFAM:PF00069	ScanProsite:PS00107
PFscan:PS50011	PANTHER:PTHR24361	PANTHER:PTHR24361:SF488	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220
SUPFAM:SSF56112	UniParc:UPI000295EB16	SEG:seg	:	:	:

Description

STE_PAK_Ste20_STLK.5 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr4G24470_001]

Coordinates

chr4:+:24260373..24271816

Molecular Weight (calculated)

78629.5 Da

IEP (calculated)

6.591

GRAVY (calculated)

-0.463

Length

703 amino acids

Sequence
(BLAST)

001: MECEFERRFP TNSKDYKLYE EVGEGVSATV YRALCIPLNQ IVAIKVLDLE KCNNDLDGIR REVQTMSLID HPNVLRAYCS FTAGHNLWVV MPYMAGGSAL
101: HIMKYAYPEG FEEPVITTLL HEVLKALVYL HAQGHIHRDI KAGNILIDAK GAVKLADFGV SACMFDTGDR QRTRNTFVGT PCWMAPEVMQ QLHGYDFKAD
201: VWSFGITALE LAHGHAPFSK YPPMKVLLMT LQNAPPGLDY ERDKRFSKSF KEMIATCLVK DPKKRPTSEK LLKHPFFKHA RSSEFLAQTI LEGLSPLGDR
301: FKALKGKEAN FLLENKDASE QLSQQKYIRG ISGWNFNLEE LKSQAALMQS LDNVYNLENV DAGNNLKDDL DSVDSSVVAL AEGVNFASNE TSREGEMQDL
401: QDLEGPLASA FPSRPLQALK ACFDVCEDMN TSSPNWKIPS KFDSMFPLQQ ASEAKDLKFG THNDENMERS ASVSSNMDNL GCQKFLSGSL LPEHILSPCR
501: NVDADAERDD IHRRCQHERY YSGPLSRQTK DSSNLTSAAM LHEEPSEGKI VQRKGRFQIT FPDASPKVAS SVNCMVSLIG GSPRKSTCAV NAASLLPTLQ
601: FLLHQNSMQK EQLIKLIKCV EQTHNVSSAY HTEASDTSTG DSQSFQASGT ERVLQNYMTN LQQSVGELAE EVQSLKLKNS QLEQQIDASL RKEKKRKDKP
701: AQR

Best Arabidopsis Sequence Match ( AT5G14720.1 )
(BLAST)

001: MESGSEKKFP LNAKDYKLYE EIGDGVSATV HRALCIPLNV VVAIKVLDLE KCNNDLDGIR REVQTMSLIN HPNVLQAHCS FTTGHQLWVV MPYMAGGSCL
101: HIIKSSYPDG FEEPVIATLL RETLKALVYL HAHGHIHRDV KAGNILLDSN GAVKLADFGV SACMFDTGDR QRSRNTFVGT PCWMAPEVMQ QLHGYDFKAD
201: VWSFGITALE LAHGHAPFSK YPPMKVLLMT LQNAPPGLDY ERDKRFSKAF KEMVGTCLVK DPKKRPTSEK LLKHPFFKHA RPADYLVKTI LNGLPPLGDR
301: YRQIKSKEAD LLMQNKSEYE AHLSQQEYIR GISAWNFNLE DLKTQAALIS DDDTSHAEEP DFNQKQCERQ DESALSPERA SSSATAPSQD DELNDIHDLE
401: SSFASFPIKP LQALKGCFDI SEDEDNATTP DWKDANVNSG QQLLTKASIG SLAETTKEED TAAQNTSLPR HVISEQKKYL SGSIIPESTF SPKRITSDAD
501: REFQQRRYQT ERSYSGSLYR TKRDSVDETS EVPHVEHKGR FKVTSADLSP KGSTNSTFTP FSGGTSSPSC LNATTASILP SIQSILQQNA MQREEILRLI
601: KYLEQTSAKQ PGSPETNVDD LLQTPPATSR ERELQSQVML LQQSFSSLTE ELKKQKQKNG QLENQLNALT HRND

Arabidopsis Description

Protein kinase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q84WU5]
SUBAcon: [plasma membrane,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.