Factsheet for GSMUA_Achr9P00100_001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

nucleus 3
vacuole 3
extracellular 3
endoplasmic reticulum 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	vacuole
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	extracellular

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr11P...
GSMUA_Achr2P01120_001
GSMUA_Achr2P19320_001
GSMUA_Achr3P09330_001
GSMUA_Achr3P25040_001
GSMUA_Achr5P06640_001
GSMUA_Achr5P07820_001
GSMUA_Achr5P27590_001
GSMUA_Achr6P15990_001
GSMUA_Achr6P23670_001
GSMUA_Achr8P05790_001
GSMUA_Achr9P17280_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G56580.1	GSMUA_Achr10P...	AT2G41100.1	17360592
AT5G56580.1	GSMUA_Achr10P...	AT2G41100.1	17360592
AT5G56580.1	GSMUA_Achr10P...	AT2G41100.1	17360592
AT5G56580.1	GSMUA_Achr10P...	AT2G41100.1	17360592
AT5G56580.1	GSMUA_Achr11P...	AT2G41100.1	17360592
AT5G56580.1	GSMUA_Achr2P01120_001	AT2G41100.1	17360592
AT5G56580.1	GSMUA_Achr3P09330_001	AT2G41100.1	17360592
AT5G56580.1	GSMUA_Achr3P25040_001	AT2G41100.1	17360592
AT5G56580.1	GSMUA_Achr5P07820_001	AT2G41100.1	17360592
AT5G56580.1	GSMUA_Achr5P27590_001	AT2G41100.1	17360592
AT5G56580.1	GSMUA_Achr6P15990_001	AT2G41100.1	17360592
AT5G56580.1	GSMUA_Achr6P23670_001	AT2G41100.1	17360592
AT5G56580.1	GSMUA_Achr8P05790_001	AT2G41100.1	17360592
AT5G56580.1	GSMUA_Achr9P17280_001	AT2G41100.1	17360592
AT5G56580.1	GSMUA_Achr10P...	AT2G43790.1	19513235
AT5G56580.1	GSMUA_Achr2P19320_001	AT2G43790.1	19513235
AT5G56580.1	GSMUA_Achr5P06640_001	AT2G43790.1	19513235

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY32868	Canola	cytosol	59.49	72.27
VIT_11s0016g02970.t01	Wine grape	cytosol	79.74	70.06
PGSC0003DMT400014637	Potato	cytosol	79.74	70.06
TraesCS4B01G315300.1	Wheat	cytosol	79.74	69.86
Os01t0510100-01	Rice	cytosol, plasma membrane	79.74	69.86
TraesCS4D01G312300.3	Wheat	cytosol	79.42	69.58
TraesCS4A01G414600.1	Wheat	cytosol	79.42	69.58
Solyc03g119490.2.1	Tomato	cytosol, extracellular	79.1	69.49
EES03540	Sorghum	cytosol	78.46	68.73
KRH72031	Soybean	cytosol	78.14	68.64
KRH33212	Soybean	cytosol	77.81	67.98
Zm00001d043609_P001	Maize	cytosol, extracellular	76.85	67.32
CDX88578	Canola	cytosol	77.17	67.04
AT5G56580.1	Thale cress	cytosol	76.53	66.85
CDY11913	Canola	cytosol	76.21	66.2
Bra002806.1-P	Field mustard	cytosol	75.56	66.01
CDY64969	Canola	cytosol	68.81	64.26
Bra006866.1-P	Field mustard	cytosol	70.42	62.93
CDY39283	Canola	plasma membrane, vacuole	67.52	59.49
GSMUA_Achr7P09660_001	Banana	cytosol	60.13	53.43
GSMUA_Achr10P...	Banana	cytosol	59.16	52.72
GSMUA_Achr10P...	Banana	plastid	57.88	42.55
GSMUA_Achr9P13590_001	Banana	mitochondrion	28.94	38.3
GSMUA_Achr9P22810_001	Banana	cytosol	15.11	36.72
GSMUA_Achr4P05870_001	Banana	cytosol, mitochondrion, plasma membrane, plastid	37.62	35.24
GSMUA_Achr11P...	Banana	cytosol	30.23	32.64
GSMUA_Achr9P18710_001	Banana	cytosol	30.23	31.76
GSMUA_Achr6P11270_001	Banana	cytosol	29.9	31.42
GSMUA_Achr8P16600_001	Banana	cytosol	26.05	31.03
GSMUA_Achr3P05000_001	Banana	plastid	38.91	26.65
GSMUA_Achr3P04830_001	Banana	cytosol	28.94	21.03
GSMUA_Achr8P11800_001	Banana	mitochondrion	27.65	19.95
GSMUA_Achr9P13450_001	Banana	cytosol	31.51	17.1
GSMUA_Achr6P28000_001	Banana	cytosol	17.68	14.78
GSMUA_Achr9P18700_001	Banana	cytosol	10.29	13.97
GSMUA_Achr4P24470_001	Banana	nucleus	30.55	13.51
GSMUA_Achr4P23660_001	Banana	cytosol	29.26	12.25
GSMUA_Achr10P...	Banana	cytosol	30.55	11.99
GSMUA_Achr11P...	Banana	cytosol	28.3	11.75
GSMUA_Achr7P00480_001	Banana	cytosol	28.94	11.1
GSMUA_Achr8P11810_001	Banana	nucleus	12.22	9.64

Protein Annotations

Gene3D:1.10.510.10	MapMan:13.4.4.1.3	MapMan:18.4.2.1	Gene3D:3.30.200.20	GO:GO:0000003	GO:GO:0000165
GO:GO:0000166	GO:GO:0000187	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674
GO:GO:0004708	GO:GO:0004871	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006464	GO:GO:0006468	GO:GO:0007049	GO:GO:0007112
GO:GO:0007154	GO:GO:0007165	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009524
GO:GO:0009653	GO:GO:0009791	GO:GO:0009987	GO:GO:0010311	GO:GO:0016043	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr9G00100_001	EnsemblPlants:GSMUA_Achr9P00100_001	EnsemblPlants:GSMUA_Achr9T00100_001	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	UniProt:M0TW67	PFAM:PF00069	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR24361	PANTHER:PTHR24361:SF616	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220
SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-noTM	UniParc:UPI000295D2F2	SEG:seg	:

Description

Mitogen-activated protein kinase kinase 1 [Source:GMGC_GENE;Acc:GSMUA_Achr9G00100_001]

Coordinates

chr9:+:154641..168708

Molecular Weight (calculated)

35240.5 Da

IEP (calculated)

5.881

GRAVY (calculated)

-0.037

Length

311 amino acids

Sequence
(BLAST)

001: MWLLYMLLLN FVHDNVQPPD SEDLEFSRED LEVIKVIGKG SGGIVQLVRH KWHGTFYALK GIQMCIQETV RKQIVQELKI NKASQCSHVV VCYHSFYHNG
101: VISLVLEYMD RGSLADIIKQ VKTILEPYLA VVLKGLVYLH HERHVIHRDI KPSNLLVNHK GEVKITDFGV SAVLASSMGQ RDTFVGTYNY MAPERISGSS
201: YDYKSDIWSL GLVILECAIG HFPYTSTEQE ESLSFYELLE AIVDQPPPFA PPDQFSPEFC SFISASIQKD PKQRLSSLEL LSHPFIKKFE DKDIDLAILV
301: GSLDPPVNLS E

Best Arabidopsis Sequence Match ( AT5G56580.1 )
(BLAST)

001: MVKIKSNLKQ LKLSVPAQES PISSFLTASG TFHDGDFLLN QKGLRLTSDE KQSRQSDSKE LDFEITAEDL ETVKVIGKGS GGVVQLVRHK WVGKFFAMKV
101: IQMNIQEEIR KQIVQELKIN QASSQCPHVV VCYHSFYHNG AFSLVLEYMD RGSLADVIRQ VKTILEPYLA VVCKQVLLGL VYLHNERHVI HRDIKPSNLL
201: VNHKGEVKIS DFGVSASLAS SMGQRDTFVG TYNYMSPERI SGSTYDYSSD IWSLGMSVLE CAIGRFPYLE SEDQQNPPSF YELLAAIVEN PPPTAPSDQF
301: SPEFCSFVSA CIQKDPPARA SSLDLLSHPF IKKFEDKDID LGILVGTLEP PVNYLR

Arabidopsis Description

MKK6Mitogen-activated protein kinase kinase 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJV0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.