CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 2
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG89812
KRG94975
KRH00834
KRH06592
KRH18664
KRH40392
KRH48074
KRH50176
KRH71277

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G56580.1	KRG89812	AT2G41100.1	17360592
AT5G56580.1	KRG94975	AT2G41100.1	17360592
AT5G56580.1	KRH18664	AT2G41100.1	17360592
AT5G56580.1	KRH50176	AT2G43790.1	19513235
AT5G56580.1	KRH71277	AT2G43790.1	19513235
AT5G56580.1	KRH00834	AT4G01370.1	19513235
AT5G56580.1	KRH06592	AT4G01370.1	19513235
AT5G56580.1	KRH40392	AT4G01370.1	19513235
AT5G56580.1	KRH48074	AT4G01370.1	19513235

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH72031	Soybean	cytosol	97.47	98.02
VIT_11s0016g02970.t01	Wine grape	cytosol	88.2	88.7
PGSC0003DMT400014637	Potato	cytosol	88.2	88.7
Solyc03g119490.2.1	Tomato	cytosol, extracellular	87.92	88.42
AT5G56580.1	Thale cress	cytosol	85.39	85.39
CDX88578	Canola	cytosol	85.67	85.2
Bra002806.1-P	Field mustard	cytosol	85.11	85.11
CDY11913	Canola	cytosol	85.39	84.92
CDY64969	Canola	cytosol	77.53	82.88
CDY32868	Canola	cytosol	59.27	82.42
Bra006866.1-P	Field mustard	cytosol	80.06	81.9
GSMUA_Achr9P00100_001	Banana	extracellular, vacuole	67.98	77.81
Zm00001d043609_P001	Maize	cytosol, extracellular	76.97	77.18
EES03540	Sorghum	cytosol	76.12	76.34
Os01t0510100-01	Rice	cytosol, plasma membrane	76.12	76.34
TraesCS4B01G315300.1	Wheat	cytosol	75.56	75.77
TraesCS4D01G312300.3	Wheat	cytosol	75.28	75.49
TraesCS4A01G414600.1	Wheat	cytosol	75.28	75.49
CDY39283	Canola	plasma membrane, vacuole	72.19	72.8
KRH02666	Soybean	cytosol	59.55	59.55
KRH19241	Soybean	cytosol, nucleus	58.71	58.71
KRH12458	Soybean	cytosol	55.06	54.6
KRH37444	Soybean	cytosol	23.6	54.19
KRH39022	Soybean	cytosol, mitochondrion	32.87	36.68
KRH39023	Soybean	mitochondrion	22.47	36.04
KRH48688	Soybean	mitochondrion	31.74	35.53
KRH47006	Soybean	cytosol, plastid	34.27	34.76
KRH74386	Soybean	cytosol, mitochondrion	32.58	34.42
KRH44646	Soybean	cytosol, plastid	33.99	33.24
KRH74639	Soybean	extracellular, plasma membrane	8.99	32.99
KRH48686	Soybean	mitochondrion	21.63	32.08
KRH25832	Soybean	cytosol	18.54	29.07
KRH56582	Soybean	cytosol	39.33	27.03
KRG93261	Soybean	cytosol	39.33	26.62
KRH46446	Soybean	cytosol	14.04	23.36
KRH23313	Soybean	cytosol	25.84	19.33
KRG93281	Soybean	cytosol	26.4	14.01
KRH56596	Soybean	cytosol	26.12	13.76
KRG88825	Soybean	cytosol	26.69	13.48
KRH55216	Soybean	cytosol	26.4	13.41
KRH44651	Soybean	cytosol	26.12	13.32
KRH22048	Soybean	cytosol	25.84	13.24
KRH47003	Soybean	cytosol	25.28	12.97
KRH27275	Soybean	cytosol, nucleus, plasma membrane	24.44	12.81
KRH34259	Soybean	cytosol	25.0	12.71
KRH75082	Soybean	cytosol	27.81	12.45
KRG92530	Soybean	cytosol	25.0	12.36
KRG90101	Soybean	cytosol	24.44	12.18
KRH70943	Soybean	cytosol	28.37	12.1
KRH17577	Soybean	cytosol	24.44	11.97

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100786284	MapMan:13.4.4.1.3	MapMan:18.4.2.1	Gene3D:3.30.200.20	EMBL:ACUP02006419
EnsemblPlantsGene:GLYMA_10G107500	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006464	GO:GO:0006468	GO:GO:0006950	GO:GO:0007049	GO:GO:0007154	GO:GO:0007165
GO:GO:0007346	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	GO:GO:0023014	GO:GO:0031098	GO:GO:0032147	InterPro:IPR000719	UniProt:K7LII3
EnsemblPlants:KRH33212	ProteinID:KRH33212	ProteinID:KRH33212.1	InterPro:Kinase-like_dom_sf	PFAM:PF00069	PIRSF:PIRSF000654
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24361	PANTHER:PTHR24361:SF616	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000233D7DB	SEG:seg

Description

hypothetical protein

Coordinates

chr10:-:24417856..24434856

Molecular Weight (calculated)

40127.6 Da

IEP (calculated)

6.351

GRAVY (calculated)

-0.149

Length

356 amino acids

Sequence
(BLAST)

001: MKMKTKTPLK QLKLAVPAQE TPITSFLTAS GTFHDGDLLL NQKGLRLISE EKESRPSDGK ELEFDFLLDD LETIKVIGKG SGGVVQLVRH KWVGRLFALK
101: VIQMNIQEDI RKQIVQELKI NQASQCPHVV VCYHSFYHNG VISLVLEYMD RGSLADVIKQ VKTILEPYLA VVCKQVLQGL VYLHNERHVI HRDIKPSNLL
201: VNHKGEVKIT DFGVSAMLAS SMGQRDTFVG TYNYMSPERI SGSTYDYSSD IWSLGMVVLE CAIGRFPYIQ SEDQQSWPSF YELLAAIVES PPPSAPPDQF
301: SPEFCTFVSS CIQKDPRDRL TSLELLDHPF IKKFEDKDLD LGILVGGLEP PVNFPR

Best Arabidopsis Sequence Match ( AT5G56580.1 )
(BLAST)

001: MVKIKSNLKQ LKLSVPAQES PISSFLTASG TFHDGDFLLN QKGLRLTSDE KQSRQSDSKE LDFEITAEDL ETVKVIGKGS GGVVQLVRHK WVGKFFAMKV
101: IQMNIQEEIR KQIVQELKIN QASSQCPHVV VCYHSFYHNG AFSLVLEYMD RGSLADVIRQ VKTILEPYLA VVCKQVLLGL VYLHNERHVI HRDIKPSNLL
201: VNHKGEVKIS DFGVSASLAS SMGQRDTFVG TYNYMSPERI SGSTYDYSSD IWSLGMSVLE CAIGRFPYLE SEDQQNPPSF YELLAAIVEN PPPTAPSDQF
301: SPEFCSFVSA CIQKDPPARA SSLDLLSHPF IKKFEDKDID LGILVGTLEP PVNYLR

Arabidopsis Description

MKK6Mitogen-activated protein kinase kinase 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJV0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.