CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

plastid 1
mitochondrion 4
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG88877
KRG97263
KRG98916
KRG98973
KRG99305
KRH06335
KRH14477
KRH46057
KRH47754
KRH50176
KRH51805
KRH61130
KRH68981
KRH71277
KRH72403
KRH73659

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G18350.1	KRH51805	AT1G59580.1	19513235
AT1G18350.1	KRH61130	AT1G59580.1	19513235
AT1G73500.1	KRG98916	AT2G42880.1	19513235
AT1G73500.1	KRH14477	AT2G42880.1	19513235
AT1G73500.1	KRH46057	AT2G42880.1	19513235
AT1G73500.1	KRH73659	AT2G42880.1	19513235
AT1G73500.1	KRH50176	AT2G43790.1	19513235
AT1G73500.1	KRH71277	AT2G43790.1	19513235
AT1G73500.1	KRH50176	AT3G59790.1	19513235
AT1G73500.1	KRH71277	AT3G59790.1	19513235
AT1G73500.1	KRG88877	AT4G01480.1	21798944
AT1G73500.1	KRG97263	AT4G01480.1	21798944
AT1G73500.1	KRG98973	AT4G01480.1	21798944
AT1G73500.1	KRG99305	AT4G01480.1	21798944
AT1G73500.1	KRH06335	AT4G01480.1	21798944
AT1G73500.1	KRH47754	AT4G01480.1	21798944
AT1G73500.1	KRH68981	AT4G01480.1	21798944
AT1G73500.1	KRH72403	AT4G01480.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH48688	Soybean	mitochondrion	92.79	93.08
KRH39023	Soybean	mitochondrion	51.72	74.32
KRH48686	Soybean	mitochondrion	52.35	69.58
VIT_17s0000g01970.t01	Wine grape	cytosol	66.46	67.52
PGSC0003DMT400083995	Potato	cytosol	67.71	64.86
Solyc03g097920.1.1	Tomato	cytosol	67.4	64.18
CDY11103	Canola	mitochondrion	60.5	62.87
Bra003842.1-P	Field mustard	mitochondrion	60.5	62.66
CDX68224	Canola	mitochondrion	60.5	62.66
Bra008099.1-P	Field mustard	mitochondrion	59.25	61.76
CDX82067	Canola	mitochondrion	59.25	61.76
CDY71921	Canola	mitochondrion	59.25	61.76
AT1G73500.1	Thale cress	mitochondrion	59.87	61.61
AT1G18350.1	Thale cress	mitochondrion	55.17	57.33
CDY24712	Canola	mitochondrion	52.98	53.31
CDY05240	Canola	mitochondrion	52.66	53.0
Bra020769.1-P	Field mustard	plastid	51.1	52.92
AT3G06230.1	Thale cress	plastid	43.26	47.1
KRH74386	Soybean	cytosol, mitochondrion	45.45	43.03
KRH47006	Soybean	cytosol, plastid	43.89	39.89
KRH44646	Soybean	cytosol, plastid	43.89	38.46
KRH37444	Soybean	cytosol	17.87	36.77
KRH02666	Soybean	cytosol	37.3	33.43
KRH72031	Soybean	cytosol	36.68	33.05
KRH33212	Soybean	cytosol	36.68	32.87
KRH19241	Soybean	cytosol, nucleus	36.36	32.58
KRH12458	Soybean	cytosol	36.36	32.31
KRH74639	Soybean	extracellular, plasma membrane	9.72	31.96
KRH25832	Soybean	cytosol	19.44	27.31
KRH56582	Soybean	cytosol	36.36	22.39
KRG93261	Soybean	cytosol	36.36	22.05
KRH46446	Soybean	cytosol	14.11	21.03
KRH23313	Soybean	cytosol	27.27	18.28
KRG88825	Soybean	cytosol	29.47	13.33
KRH55216	Soybean	cytosol	29.15	13.27
KRG93281	Soybean	cytosol	27.9	13.26
KRH56596	Soybean	cytosol	27.9	13.17
KRH22048	Soybean	cytosol	28.21	12.95
KRH75082	Soybean	cytosol	31.66	12.7
KRH27275	Soybean	cytosol, nucleus, plasma membrane	26.33	12.37
KRH70943	Soybean	cytosol	31.66	12.1
KRH44651	Soybean	cytosol	26.33	12.03
KRH34259	Soybean	cytosol	26.02	11.86
KRG90101	Soybean	cytosol	26.02	11.62
KRH17577	Soybean	cytosol	26.02	11.42
KRH47003	Soybean	cytosol	24.76	11.38
KRG92530	Soybean	cytosol	25.08	11.11

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100804100	MapMan:18.4.2.1	Gene3D:3.30.200.20	UniProt:A0A0R4J446	EMBL:ACUP02005905
EnsemblPlantsGene:GLYMA_09G172500	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006464	GO:GO:0006468	GO:GO:0006950	GO:GO:0007049	GO:GO:0007154	GO:GO:0007165
GO:GO:0007346	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	GO:GO:0023014	GO:GO:0031098	GO:GO:0032147	InterPro:IPR000719	EnsemblPlants:KRH39022
ProteinID:KRH39022	ProteinID:KRH39022.1	InterPro:Kinase-like_dom_sf	PFAM:PF00069	PIRSF:PIRSF000654	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24361	PANTHER:PTHR24361:SF453	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI00018C6CFA	SEG:seg	:

Description

hypothetical protein

Coordinates

chr9:+:39717628..39719071

Molecular Weight (calculated)

35139.9 Da

IEP (calculated)

6.778

GRAVY (calculated)

-0.233

Length

319 amino acids

Sequence
(BLAST)

001: MALVRHRRHP NLRLPLPEPS ERRPRFPLPL PPTTTIAKPS AGDTIASADL EKLAVLGHGN GGTVYKVRHK TTSATYALKI IHSDADATTR RRAFSETSIL
101: RRATDCPHVV RFHGSFENPS GDVAILMEYM DGGTLETALA TGGTFSEERL AKVARDVLEG LAYLHARNIA HRDIKPANIL VNSEGEVKIA DFGVSKLMCR
201: TLEACNSYVG TCAYMSPDRF DPEAYGGNYN GFAADIWSLG LTLFELYVGH FPFLQAGQRP DWATLMCAIC FSDPPSLPET ASPEFHDFVE CCLKKESGER
301: WTAAQLLTHP FVCKDPETC

Best Arabidopsis Sequence Match ( AT1G73500.1 )
(BLAST)

001: MALVRERRQL NLRLPLPPIS DRRFSTSSSS ATTTTVAGCN GISACDLEKL NVLGCGNGGI VYKVRHKTTS EIYALKTVNG DMDPIFTRQL MREMEILRRT
101: DSPYVVKCHG IFEKPVVGEV SILMEYMDGG TLESLRGGVT EQKLAGFAKQ ILKGLSYLHA LKIVHRDIKP ANLLLNSKNE VKIADFGVSK ILVRSLDSCN
201: SYVGTCAYMS PERFDSESSG GSSDIYAGDI WSFGLMMLEL LVGHFPLLPP GQRPDWATLM CAVCFGEPPR APEGCSEEFR SFVECCLRKD SSKRWTAPQL
301: LAHPFLREDL

Arabidopsis Description

MKK9Mitogen-activated protein kinase kinase 9 [Source:UniProtKB/Swiss-Prot;Acc:Q9FX43]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.