CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG88877
KRG97263
KRG98973
KRG99305
KRH06335
KRH13875
KRH39527
KRH43426
KRH45468
KRH45469
KRH47754
KRH68981
KRH72403
KRH74431
KRH75634

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G01480.1	KRG88877	AT1G01050.1	21798944
AT4G01480.1	KRG97263	AT1G01050.1	21798944
AT4G01480.1	KRG98973	AT1G01050.1	21798944
AT4G01480.1	KRG99305	AT1G01050.1	21798944
AT4G01480.1	KRH06335	AT1G01050.1	21798944
AT4G01480.1	KRH47754	AT1G01050.1	21798944
AT4G01480.1	KRH68981	AT1G01050.1	21798944
AT4G01480.1	KRH72403	AT1G01050.1	21798944
AT4G01480.1	KRH13875	AT2G32840.1	21798944
AT4G01480.1	KRH43426	AT2G32840.1	21798944
AT4G01480.1	KRH39527	AT5G65683.1	21798944
AT4G01480.1	KRH45468	AT5G65683.1	21798944
AT4G01480.1	KRH45469	AT5G65683.1	21798944
AT4G01480.1	KRH74431	AT5G65683.1	21798944
AT4G01480.1	KRH75634	AT5G65683.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG97263	Soybean	cytosol	98.58	98.58
KRH47754	Soybean	cytosol	90.05	89.62
CDY55328	Canola	cytosol	87.2	89.32
Bra032616.1-P	Field mustard	cytosol	85.78	89.16
CDY32448	Canola	cytosol	86.73	88.83
KRG98973	Soybean	cytosol	81.52	87.76
CDY15206	Canola	cytosol	86.73	87.56
Bra033292.1-P	Field mustard	cytosol	87.68	87.26
CDX90003	Canola	cytosol	87.68	87.26
AT1G01050.1	Thale cress	cytosol	86.73	86.32
Solyc08g083370.2.1	Tomato	cytosol	82.46	84.88
EER94266	Sorghum	cytosol	81.99	84.8
CDY27516	Canola	cytosol	86.73	84.72
Bra040479.1-P	Field mustard	cytosol	86.73	84.72
CDY48009	Canola	cytosol	86.73	84.72
CDY01933	Canola	cytosol	85.78	84.58
CDX97250	Canola	cytosol	85.78	84.58
Bra008551.1-P	Field mustard	cytosol	85.78	84.58
GSMUA_Achr3P22500_001	Banana	cytosol	84.83	84.43
PGSC0003DMT400015012	Potato	cytosol	76.3	84.29
AT2G46860.1	Thale cress	cytosol	86.26	84.26
Bra037416.1-P	Field mustard	cytosol	85.31	84.11
GSMUA_Achr6P19560_001	Banana	cytosol	84.36	83.96
CDY07141	Canola	cytosol	84.83	83.64
Os10t0406100-01	Rice	cytosol	80.57	83.33
GSMUA_Achr8P07910_001	Banana	cytosol	82.94	82.55
Os04t0687100-01	Rice	cytosol, plasma membrane	82.46	81.69
GSMUA_Achr7P03170_001	Banana	cytosol	81.99	81.6
PGSC0003DMT400012843	Potato	extracellular	81.52	81.52
AT4G01480.1	Thale cress	cytosol	83.41	81.48
Solyc12g055830.1.1	Tomato	extracellular	81.99	81.22
TraesCS2D01G587100.1	Wheat	cytosol	80.57	80.57
KXG27493	Sorghum	cytosol	81.52	80.37
Solyc08g013680.2.1	Tomato	cytosol	42.18	80.18
TraesCS1B01G355800.1	Wheat	cytosol	77.73	80.0
Zm00001d026680_P003	Maize	cytosol	81.04	79.91
TraesCS1B01G283300.1	Wheat	cytosol	81.52	79.63
TraesCS1D01G273500.1	Wheat	cytosol	81.52	79.63
VIT_02s0025g02980.t01	Wine grape	cytosol	80.57	79.44
PGSC0003DMT400031865	Potato	cytosol	79.62	79.25
Os01t0866500-01	Rice	cytosol	79.62	79.25
TraesCS1A01G273500.1	Wheat	cytosol	81.04	79.17
TraesCS2A01G576400.1	Wheat	golgi	81.04	79.17
TraesCS1A01G342700.1	Wheat	cytosol	76.78	79.02
TraesCS1D01G344800.2	Wheat	cytosol	76.3	78.54
KRH06335	Soybean	cytosol	82.94	78.48
OQU87920	Sorghum	cytosol	61.14	78.18
Os05t0438500-01	Rice	cytosol	82.94	78.12
Zm00001d010171_P002	Maize	cytosol, extracellular	82.94	78.12
TraesCS2B01G611000.2	Wheat	cytosol	80.09	77.88
KRH19727	Soybean	cytosol	79.15	77.31
EES18298	Sorghum	cytosol	83.89	77.29
KRH32318	Soybean	cytosol	78.2	76.39
KRH28709	Soybean	nucleus	76.78	76.06
KRH76757	Soybean	cytosol	76.78	76.06
KRH72403	Soybean	cytosol	47.87	74.81
KRG88877	Soybean	cytosol	40.76	74.78
HORVU1Hr1G075660.1	Barley	cytosol	78.67	73.13
TraesCS3B01G077900.2	Wheat	plastid	81.04	71.55
KRG99305	Soybean	cytosol	66.82	70.15
KRG95822	Soybean	cytosol	75.83	69.87
HORVU1Hr1G075110.1	Barley	plastid	76.78	69.83
KRH67552	Soybean	cytosol	75.83	69.26
Zm00001d002889_P002	Maize	cytosol	80.57	67.19
GSMUA_Achr5P26130_001	Banana	plastid	83.89	60.82
Os01t0322300-00	Rice	cytosol	19.91	56.76
HORVU6Hr1G058900.2	Barley	cytosol	39.34	46.11
HORVU2Hr1G065020.1	Barley	cytosol	26.07	39.86
KRH10663	Soybean	nucleus	29.38	21.53
KRH21683	Soybean	nucleus	28.91	21.18

Protein Annotations

KEGG:00190+3.6.1.1	EntrezGene:100780413	Gene3D:3.90.80.10	MapMan:35.1	EMBL:ACUP02002128	EnsemblPlantsGene:GLYMA_03G262000
GO:GO:0000287	GO:GO:0003674	GO:GO:0003824	GO:GO:0004427	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006796	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016787	UniProt:I1JS54	InterPro:IPR036649	EnsemblPlants:KRH68981	ProteinID:KRH68981
ProteinID:KRH68981.1	HAMAP:MF_00209	PFAM:PF00719	ScanProsite:PS00387	PANTHER:PTHR10286	PANTHER:PTHR10286:SF10
MetaCyc:PWY-7805	MetaCyc:PWY-7807	InterPro:Pyrophosphatase	InterPro:Pyrophosphatase_sf	SUPFAM:SSF50324	UniParc:UPI00023379C7

Description

hypothetical protein

Coordinates

chr3:+:45517529..45519491

Molecular Weight (calculated)

24163.0 Da

IEP (calculated)

5.375

GRAVY (calculated)

-0.372

Length

211 amino acids

Sequence
(BLAST)

001: MSENGEEAGE NRPVPRLNER ILSSLSKRSV AAHPWHDLEI GPEAPQIFNC VVEITKGSKV KYELDKKTGL IKVDRVLYSS VVYPHNYGFI PRTLCEDNDP
101: IDVLVLMQEP VLPGCFLRAR AIGLMPMIDG GEKDDKIIAV CADDPEYKHF TDYRELAPHR ISEIRRFFED YKKNEHKEVA VNDFLPASVA LDAIQYSMDL
201: YAEYILHTLR R

Best Arabidopsis Sequence Match ( AT2G46860.1 )
(BLAST)

001: MSEEAYEETQ ESSQSPRPVP KLNERILSTL SRRSVAAHPW HDLEIGPEAP LVFNVVVEIT KGSKVKYELD KKTGLIKVDR ILYSSVVYPH NYGFIPRTLC
101: EDNDPLDVLV LMQEPVLPGC FLRARAIGLM PMIDQGEKDD KIIAVCADDP EYKHFTDIKQ LAPHRLQEIR RFFEDYKKNE NKKVAVNDFL PSESAHEAIQ
201: YSMDLYAEYI LHTLRR

Arabidopsis Description

PPA3PPa3 [Source:UniProtKB/TrEMBL;Acc:A0A178VZ15]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.