CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra040479.1-P	Field mustard	cytosol	100.0	100.0
CDY48009	Canola	cytosol	100.0	100.0
AT2G46860.1	Thale cress	cytosol	95.83	95.83
CDY32448	Canola	cytosol	87.04	91.26
CDY55328	Canola	cytosol	86.57	90.78
CDY15206	Canola	cytosol	87.5	90.43
CDX90003	Canola	cytosol	87.96	89.62
CDY07141	Canola	cytosol	86.11	86.92
Solyc08g083370.2.1	Tomato	cytosol	82.41	86.83
KRG97263	Soybean	cytosol	84.72	86.73
KRH68981	Soybean	cytosol	84.72	86.73
CDX97250	Canola	cytosol	85.65	86.45
CDY01933	Canola	cytosol	85.65	86.45
PGSC0003DMT400015012	Potato	cytosol	76.39	86.39
KRH47754	Soybean	cytosol	84.72	86.32
PGSC0003DMT400012843	Potato	extracellular	82.87	84.83
Solyc12g055830.1.1	Tomato	extracellular	82.87	84.04
Solyc08g013680.2.1	Tomato	cytosol	43.06	83.78
PGSC0003DMT400031865	Potato	cytosol	79.63	81.13
VIT_02s0025g02980.t01	Wine grape	cytosol	79.63	80.37
KRG98973	Soybean	cytosol	71.3	78.57
CDX73537	Canola	cytosol	77.78	77.42
CDX78192	Canola	cytosol	77.31	76.96
CDY69447	Canola	cytosol	27.78	75.95
KRH06335	Soybean	cytosol	78.24	75.78
CDY46306	Canola	cytosol	70.37	69.41
CDY64108	Canola	cytosol	69.91	68.95
CDY30321	Canola	cytosol	69.91	68.95
KRG88877	Soybean	cytosol	35.65	66.96
CDY25149	Canola	cytosol	70.37	65.24
KRG99305	Soybean	cytosol	60.65	65.17
KRH72403	Soybean	cytosol	40.28	64.44
CDY44812	Canola	cytosol	18.06	24.68
CDY71464	Canola	plastid	28.24	23.02
CDY21593	Canola	plastid	29.17	21.28
CDX69894	Canola	plastid	29.17	21.14
CDX81134	Canola	plastid	28.24	20.68
CDY56549	Canola	plastid	28.24	20.61
CDX85804	Canola	plastid	24.54	18.79
CDX81136	Canola	cytosol	6.48	18.42

Protein Annotations

KEGG:00190+3.6.1.1	Gene3D:3.90.80.10	MapMan:35.1	GO:A0A078IF82	UniProt:A0A078IF82	EnsemblPlants:CDY27516
ProteinID:CDY27516	ProteinID:CDY27516.1	ProteinID:CDY48009.1	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824
GO:GO:0004427	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006796	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	EnsemblPlantsGene:GSBRNA2T00038191001
InterPro:IPR036649	HAMAP:MF_00209	PFAM:PF00719	ScanProsite:PS00387	PANTHER:PTHR10286	PANTHER:PTHR10286:SF10
InterPro:Pyrophosphatase	InterPro:Pyrophosphatase_sf	SUPFAM:SSF50324	UniParc:UPI0001CA9F2D	SEG:seg	:

Description

BnaC04g51570DBnaA04g26810D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IF82]

Coordinates

chrLK032205:-:469812..471522

Molecular Weight (calculated)

24963.0 Da

IEP (calculated)

5.375

GRAVY (calculated)

-0.418

Length

216 amino acids

Sequence
(BLAST)

001: MSEETYEETM ETSQSPRPAP KLNERILSTL SRRSVAAHPW HDLEIGPEAP LVFNVVVEIT KGSKVKYELD KKTGLIKVDR ILYSSVVYPH NYGFIPRTLC
101: EDNDPLDVLV LMQEPVLPGC FLRARAIGLM PMIDQGEMDD KIIAVCADDP EYKHFTDIKQ LAPHRLSEIR RFFEDYKKNE HKEVAVNDFL PSEKAHEAIQ
201: YSMDLYAEYI LHTLRR

Best Arabidopsis Sequence Match ( AT2G46860.1 )
(BLAST)

001: MSEEAYEETQ ESSQSPRPVP KLNERILSTL SRRSVAAHPW HDLEIGPEAP LVFNVVVEIT KGSKVKYELD KKTGLIKVDR ILYSSVVYPH NYGFIPRTLC
101: EDNDPLDVLV LMQEPVLPGC FLRARAIGLM PMIDQGEKDD KIIAVCADDP EYKHFTDIKQ LAPHRLQEIR RFFEDYKKNE NKKVAVNDFL PSESAHEAIQ
201: YSMDLYAEYI LHTLRR

Arabidopsis Description

PPA3PPa3 [Source:UniProtKB/TrEMBL;Acc:A0A178VZ15]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.