Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
- cytoskeleton 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX78192 | Canola | cytosol | 99.08 | 99.08 |
| Bra007016.1-P | Field mustard | cytosol | 98.16 | 98.16 |
| AT3G53620.1 | Thale cress | cytosol | 93.09 | 93.52 |
| VIT_08s0040g02470.t01 | Wine grape | cytosol | 86.18 | 86.57 |
| KRH19727 | Soybean | cytosol | 85.71 | 86.11 |
| GSMUA_Achr10P... | Banana | cytosol | 85.25 | 86.05 |
| KRH32318 | Soybean | cytosol | 84.79 | 85.19 |
| CDY32448 | Canola | cytosol | 79.26 | 83.5 |
| Os05t0114000-01 | Rice | cytosol | 82.95 | 83.33 |
| Zm00001d035616_P001 | Maize | cytosol | 84.33 | 83.18 |
| EES18902 | Sorghum | cytosol | 82.03 | 83.18 |
| CDY55328 | Canola | cytosol | 78.8 | 83.01 |
| Solyc09g010380.2.1 | Tomato | cytosol | 82.49 | 82.87 |
| PGSC0003DMT400023069 | Potato | cytosol | 82.49 | 82.87 |
| CDY15206 | Canola | cytosol | 79.72 | 82.78 |
| TraesCS1B01G049200.1 | Wheat | cytosol | 82.03 | 82.03 |
| TraesCS1A01G038300.1 | Wheat | cytosol | 82.03 | 82.03 |
| TraesCS1D01G040000.1 | Wheat | cytosol | 82.03 | 82.03 |
| CDX90003 | Canola | cytosol | 79.72 | 81.6 |
| Os01t0974800-01 | Rice | cytosol | 81.57 | 81.57 |
| CDY01933 | Canola | cytosol | 80.18 | 81.31 |
| CDX97250 | Canola | cytosol | 80.18 | 81.31 |
| CDY07141 | Canola | cytosol | 79.26 | 80.37 |
| TraesCS3D01G539900.1 | Wheat | cytosol | 82.03 | 79.46 |
| TraesCS3B01G611800.1 | Wheat | cytosol | 83.41 | 79.39 |
| HORVU3Hr1G116580.1 | Barley | cytosol | 83.87 | 79.13 |
| CDY48009 | Canola | cytosol | 77.42 | 77.78 |
| CDY27516 | Canola | cytosol | 77.42 | 77.78 |
| TraesCS3B01G611600.1 | Wheat | golgi | 82.49 | 76.82 |
| TraesCS3A01G534700.1 | Wheat | plastid | 82.95 | 75.95 |
| TraesCS3A01G534500.1 | Wheat | cytosol, plastid | 82.95 | 75.95 |
| HORVU1Hr1G005920.4 | Barley | cytosol, plastid | 82.03 | 74.48 |
| CDY64108 | Canola | cytosol | 74.65 | 73.97 |
| CDY30321 | Canola | cytosol | 74.65 | 73.97 |
| CDY46306 | Canola | cytosol | 74.19 | 73.52 |
| CDY25149 | Canola | cytosol | 74.65 | 69.53 |
| TraesCS3D01G540100.1 | Wheat | cytosol, plastid | 83.41 | 68.82 |
| CDY69447 | Canola | cytosol | 24.42 | 67.09 |
| HORVU3Hr1G116650.3 | Barley | cytosol, endoplasmic reticulum | 82.95 | 56.43 |
| Os11t0612950-00 | Rice | cytosol | 15.67 | 42.5 |
| CDY44812 | Canola | cytosol | 17.97 | 24.68 |
| CDY71464 | Canola | plastid | 28.57 | 23.4 |
| CDX81134 | Canola | plastid | 29.03 | 21.36 |
| CDY56549 | Canola | plastid | 29.03 | 21.28 |
| CDY21593 | Canola | plastid | 29.03 | 21.28 |
| CDX69894 | Canola | plastid | 29.03 | 21.14 |
| CDX85804 | Canola | plastid | 25.81 | 19.86 |
| CDX81136 | Canola | cytosol | 5.99 | 17.11 |
Protein Annotations
| KEGG:00190+3.6.1.1 | Gene3D:3.90.80.10 | MapMan:35.1 | GO:A0A078C9N1 | EnsemblPlants:CDX73537 | ProteinID:CDX73537 |
| ProteinID:CDX73537.1 | ncoils:Coil | GO:GO:0000287 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004427 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006796 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016787 | EnsemblPlantsGene:GSBRNA2T00109065001 | InterPro:IPR036649 |
| HAMAP:MF_00209 | PFAM:PF00719 | ScanProsite:PS00387 | PANTHER:PTHR10286 | PANTHER:PTHR10286:SF40 | InterPro:Pyrophosphatase |
| InterPro:Pyrophosphatase_sf | SUPFAM:SSF50324 | UniParc:UPI0004EC7CDF | : | : | : |
Description
BnaC08g24660D
Coordinates
chrLK031799:-:1032605..1035404
Molecular Weight (calculated)
24704.8 Da
IEP (calculated)
5.159
GRAVY (calculated)
-0.259
Length
217 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPPIEIAAT KTYAEKQASL PLLNERILSS MTHRSVAAHP WHDLEIGPEA PIIFNCVVEI GKGSKVKYEL DKTTGLIKVD RILYSSVVYP HNYGFIPRTL
101: CEDNDPIDVL VIMQEPVIPG CFLRAKAIGL MPMIDQGEKD DKIIAVCADD PEYRHYNDIK ELPPHRLAEI RRFFEDYKKN ENKEVAVNDF LPATAAYEAV
201: QHSMDLYADY VMETLRR
101: CEDNDPIDVL VIMQEPVIPG CFLRAKAIGL MPMIDQGEKD DKIIAVCADD PEYRHYNDIK ELPPHRLAEI RRFFEDYKKN ENKEVAVNDF LPATAAYEAV
201: QHSMDLYADY VMETLRR
001: MAPPIEVSTK SYVEKHVSLP TLNERILSSM SHRSVAAHPW HDLEIGPEAP IIFNCVVEIG KGSKVKYELD KTTGLIKVDR ILYSSVVYPH NYGFIPRTLC
101: EDSDPIDVLV IMQEPVIPGC FLRAKAIGLM PMIDQGEKDD KIIAVCADDP EYRHYNDISE LPPHRMAEIR RFFEDYKKNE NKEVAVNDFL PATAAYDAVQ
201: HSMDLYADYV VENLRR
101: EDSDPIDVLV IMQEPVIPGC FLRAKAIGLM PMIDQGEKDD KIIAVCADDP EYRHYNDISE LPPHRMAEIR RFFEDYKKNE NKEVAVNDFL PATAAYDAVQ
201: HSMDLYADYV VENLRR
Arabidopsis Description
PPA4PPa4 [Source:UniProtKB/TrEMBL;Acc:A0A178VKC0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.