Factsheet for VIT_08s0040g02470.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	cytosol	90.28	90.7
Solyc09g010380.2.1	Tomato	cytosol	87.96	87.96
PGSC0003DMT400023069	Potato	cytosol	87.5	87.5
KRH19727	Soybean	cytosol	87.04	87.04
Bra039808.1-P	Field mustard	cytosol	86.57	86.18
CDX73537	Canola	cytosol	86.57	86.18
CDX78192	Canola	cytosol	86.57	86.18
Bra007016.1-P	Field mustard	cytosol	85.65	85.25
KRH32318	Soybean	cytosol	85.19	85.19
AT3G53620.1	Thale cress	cytosol	84.72	84.72
Os05t0114000-01	Rice	cytosol	83.8	83.8
Zm00001d035616_P001	Maize	cytosol	85.19	83.64
EES18902	Sorghum	cytosol	82.41	83.18
VIT_02s0025g02980.t01	Wine grape	cytosol	81.94	82.71
TraesCS1D01G040000.1	Wheat	cytosol	82.41	82.03
TraesCS1A01G038300.1	Wheat	cytosol	81.94	81.57
TraesCS1B01G049200.1	Wheat	cytosol	81.94	81.57
VIT_04s0023g02050.t01	Wine grape	cytosol	80.56	80.93
TraesCS3D01G539900.1	Wheat	cytosol	83.8	80.8
Os01t0974800-01	Rice	cytosol	81.02	80.65
TraesCS3B01G611800.1	Wheat	cytosol	84.26	79.82
HORVU3Hr1G116580.1	Barley	cytosol	83.8	78.7
TraesCS3B01G611600.1	Wheat	golgi	84.26	78.11
TraesCS3A01G534700.1	Wheat	plastid	84.72	77.22
TraesCS3A01G534500.1	Wheat	cytosol, plastid	84.26	76.79
HORVU1Hr1G005920.4	Barley	cytosol, plastid	82.41	74.48
TraesCS3D01G540100.1	Wheat	cytosol, plastid	83.8	68.82
HORVU3Hr1G116650.3	Barley	cytosol, endoplasmic reticulum	83.33	56.43
Os11t0612950-00	Rice	cytosol	15.28	41.25
VIT_18s0001g08170.t01	Wine grape	cytosol	25.46	18.09
VIT_03s0088g01290.t01	Wine grape	plastid	9.26	13.33

Protein Annotations

KEGG:00190+3.6.1.1	EntrezGene:100258490	wikigene:100258490	Gene3D:3.90.80.10	MapMan:35.1	ProteinID:CBI32684
ProteinID:CBI32684.3	UniProt:D7TQG4	EMBL:FN596008	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824
GO:GO:0004427	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005829	GO:GO:0006796	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787
GO:GO:0046686	InterPro:IPR036649	EntrezGene:LOC100258490	wikigene:LOC100258490	HAMAP:MF_00209	PFAM:PF00719
ScanProsite:PS00387	PANTHER:PTHR10286	PANTHER:PTHR10286:SF40	InterPro:Pyrophosphatase	InterPro:Pyrophosphatase_sf	SUPFAM:SSF50324
TIGR:TC58313	UniParc:UPI0001983CEA	ArrayExpress:VIT_08s0040g02470	EnsemblPlantsGene:VIT_08s0040g02470	EnsemblPlants:VIT_08s0040g02470.t01	unigene:Vvi.7162
RefSeq:XP_002278867	RefSeq:XP_002278867.1	:	:	:	:

Description

No Description!

Coordinates

chr8:-:13529297..13534881

Molecular Weight (calculated)

24586.5 Da

IEP (calculated)

6.233

GRAVY (calculated)

-0.407

Length

216 amino acids

Sequence
(BLAST)

001: MAPPIETPNK ALNSHQHSHP PLNERILSSM TRRAVAAHPW HDLEIGPGAP TIFNCVVEIG KGSKVKYELD KKTGLIKVDR VLYSSVVYPH NYGFIPRTLC
101: EDNDPMDVLV IMQEPVLPGC FLRAKAIGLM PMIDQGEKDD KIIAVCADDP EYRHYTDINE LPPHRLAEIR RFFEDYKKNE NKEVAVNDFL PSSSAYEAIQ
201: HSMNLYADYI VESLRR

Best Arabidopsis Sequence Match ( AT3G53620.1 )
(BLAST)

001: MAPPIEVSTK SYVEKHVSLP TLNERILSSM SHRSVAAHPW HDLEIGPEAP IIFNCVVEIG KGSKVKYELD KTTGLIKVDR ILYSSVVYPH NYGFIPRTLC
101: EDSDPIDVLV IMQEPVIPGC FLRAKAIGLM PMIDQGEKDD KIIAVCADDP EYRHYNDISE LPPHRMAEIR RFFEDYKKNE NKEVAVNDFL PATAAYDAVQ
201: HSMDLYADYV VENLRR

Arabidopsis Description

PPA4PPa4 [Source:UniProtKB/TrEMBL;Acc:A0A178VKC0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.