Factsheet for Zm00001d035616_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES18902	Sorghum	cytosol	93.64	96.26
Os05t0114000-01	Rice	cytosol	93.18	94.91
GSMUA_Achr6P15350_001	Banana	unclear	86.36	88.37
TraesCS1D01G040000.1	Wheat	cytosol	86.36	87.56
TraesCS1B01G049200.1	Wheat	cytosol	85.45	86.64
TraesCS1A01G038300.1	Wheat	cytosol	85.0	86.18
VIT_08s0040g02470.t01	Wine grape	cytosol	83.64	85.19
CDX73537	Canola	cytosol	83.18	84.33
AT3G53620.1	Thale cress	cytosol	82.73	84.26
Bra039808.1-P	Field mustard	cytosol	82.73	83.87
CDX78192	Canola	cytosol	82.73	83.87
KRH19727	Soybean	cytosol	82.27	83.8
Bra007016.1-P	Field mustard	cytosol	81.82	82.95
PGSC0003DMT400023069	Potato	cytosol	81.36	82.87
KRH32318	Soybean	cytosol	81.36	82.87
Solyc09g010380.2.1	Tomato	cytosol	80.91	82.41
Zm00001d051564_P001	Maize	cytosol	71.82	82.29
HORVU1Hr1G005920.4	Barley	cytosol, plastid	87.27	80.33
KRG95822	Soybean	cytosol	82.73	79.48
KRH67552	Soybean	cytosol	83.18	79.22
Zm00001d026680_P003	Maize	cytosol	76.36	78.5
Zm00001d010171_P002	Maize	cytosol, extracellular	77.73	76.34
GSMUA_Achr3P17710_001	Banana	cytosol, extracellular	56.82	72.67
Zm00001d002889_P002	Maize	cytosol	75.45	65.61
Zm00001d017770_P001	Maize	mitochondrion	74.55	51.73
Zm00001d018197_P001	Maize	plastid	28.18	21.53

Protein Annotations

KEGG:00190+3.6.1.1	EntrezGene:100216827	Gene3D:3.90.80.10	MapMan:35.1	UniProt:A0A1D6LHK3	ProteinID:AQK79353.1
GO:GO:0000287	GO:GO:0003674	GO:GO:0003824	GO:GO:0004427	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006796	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016787	InterPro:IPR036649	HAMAP:MF_00209	PFAM:PF00719	ScanProsite:PS00387
PANTHER:PTHR10286	PANTHER:PTHR10286:SF40	InterPro:Pyrophosphatase	InterPro:Pyrophosphatase_sf	SUPFAM:SSF50324	UniParc:UPI000845267E
EnsemblPlantsGene:Zm00001d035616	EnsemblPlants:Zm00001d035616_P001	EnsemblPlants:Zm00001d035616_T001	:	:	:

Description

Soluble inorganic pyrophosphatase 4

Coordinates

chr6:+:37235178..37239054

Molecular Weight (calculated)

24808.0 Da

IEP (calculated)

5.646

GRAVY (calculated)

-0.174

Length

220 amino acids

Sequence
(BLAST)

001: MSSVVLMAPA VEAVKETGTF QKVPALNERI LSSMSRRSVA AHPWHDLEIG PGAPTIFNCV IEIPRGSKVK YELDKKTGLI KVDRVLYSSV VYPHNYGFIP
101: RTLCEDSDPL DVLVIMQEPV IPGCFLRAKA IGLMPMIDQG EADDKIIAVC ADDPEYRHYN DIKELPPHRL AEIRRFFEDY KKNENKEVAV NDFLPASAAY
201: EAIQHSMDLY ATYIVEGLRR

Best Arabidopsis Sequence Match ( AT3G53620.1 )
(BLAST)

001: MAPPIEVSTK SYVEKHVSLP TLNERILSSM SHRSVAAHPW HDLEIGPEAP IIFNCVVEIG KGSKVKYELD KTTGLIKVDR ILYSSVVYPH NYGFIPRTLC
101: EDSDPIDVLV IMQEPVIPGC FLRAKAIGLM PMIDQGEKDD KIIAVCADDP EYRHYNDISE LPPHRMAEIR RFFEDYKKNE NKEVAVNDFL PATAAYDAVQ
201: HSMDLYADYV VENLRR

Arabidopsis Description

PPA4PPa4 [Source:UniProtKB/TrEMBL;Acc:A0A178VKC0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.