Factsheet for Bra007016.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX78192	Canola	cytosol	99.08	99.08
CDX73537	Canola	cytosol	98.16	98.16
Bra039808.1-P	Field mustard	cytosol	95.85	95.85
AT3G53620.1	Thale cress	cytosol	93.09	93.52
VIT_08s0040g02470.t01	Wine grape	cytosol	85.25	85.65
KRH19727	Soybean	cytosol	84.79	85.19
GSMUA_Achr10P...	Banana	cytosol	84.33	85.12
KRH32318	Soybean	cytosol	83.87	84.26
PGSC0003DMT400023069	Potato	cytosol	82.95	83.33
Bra032616.1-P	Field mustard	cytosol	77.42	82.76
Solyc09g010380.2.1	Tomato	cytosol	82.03	82.41
Os05t0114000-01	Rice	cytosol	82.03	82.41
Zm00001d035616_P001	Maize	cytosol	82.95	81.82
EES18902	Sorghum	cytosol	80.65	81.78
TraesCS1A01G038300.1	Wheat	cytosol	81.11	81.11
TraesCS1B01G049200.1	Wheat	cytosol	81.11	81.11
TraesCS1D01G040000.1	Wheat	cytosol	81.11	81.11
Bra033292.1-P	Field mustard	cytosol	78.8	80.66
Os01t0974800-01	Rice	cytosol	80.65	80.65
Bra008551.1-P	Field mustard	cytosol	79.26	80.37
Bra037416.1-P	Field mustard	cytosol	78.8	79.91
TraesCS3D01G539900.1	Wheat	cytosol	81.11	78.57
TraesCS3B01G611800.1	Wheat	cytosol	82.49	78.51
HORVU3Hr1G116580.1	Barley	cytosol	82.95	78.26
Bra040479.1-P	Field mustard	cytosol	76.04	76.39
TraesCS3B01G611600.1	Wheat	golgi	81.57	75.97
TraesCS3A01G534500.1	Wheat	cytosol, plastid	82.03	75.11
TraesCS3A01G534700.1	Wheat	plastid	82.03	75.11
Bra037229.1-P	Field mustard	cytosol	75.12	74.43
HORVU1Hr1G005920.4	Barley	cytosol, plastid	81.11	73.64
TraesCS3D01G540100.1	Wheat	cytosol, plastid	82.49	68.06
HORVU3Hr1G116650.3	Barley	cytosol, endoplasmic reticulum	82.03	55.8
Os11t0612950-00	Rice	cytosol	15.67	42.5
Bra039627.1-P	Field mustard	plastid	74.65	23.75
Bra006029.1-P	Field mustard	plastid	28.57	20.95
Bra009396.1-P	Field mustard	plastid	28.57	20.81
Bra028625.1-P	Field mustard	plastid	10.6	13.86

Protein Annotations

KEGG:00190+3.6.1.1	Gene3D:3.90.80.10	MapMan:35.1	EnsemblPlantsGene:Bra007016	EnsemblPlants:Bra007016.1	EnsemblPlants:Bra007016.1-P
GO:GO:0000287	GO:GO:0003674	GO:GO:0003824	GO:GO:0004427	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006796	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016787	InterPro:IPR036649	UniProt:M4CS24	HAMAP:MF_00209	PFAM:PF00719
ScanProsite:PS00387	PANTHER:PTHR10286	PANTHER:PTHR10286:SF40	InterPro:Pyrophosphatase	InterPro:Pyrophosphatase_sf	SUPFAM:SSF50324
UniParc:UPI0002542F94	:	:	:	:	:

Description

AT3G53620 (E=5e-116) AtPPa4 | AtPPa4 (Arabidopsis thaliana pyrophosphorylase 4); inorganic diphosphatase

Coordinates

chrA09:+:26846629..26848450

Molecular Weight (calculated)

24654.7 Da

IEP (calculated)

5.017

GRAVY (calculated)

-0.256

Length

217 amino acids

Sequence
(BLAST)

001: MAPPIEIAAT KSYAEKQVSL PLLNERILSS MTHRSVAAHP WHDLEIGPEA PIIFNCVVEI GKGGKVKEEL DKTTGLIKVD RILYSSVVYP HNYGFIPRTL
101: CEDNDPIDVL VIMQEPVIPG CFLRAKAIGL MPMIDQGEKD DKIIAVCADD PEYRHYNDIK ELPPHRLAEI RRFFEDYKKN ENKEVAVNDF LPATAAYEAV
201: QHSMDLYADY VMETLRR

Best Arabidopsis Sequence Match ( AT3G53620.1 )
(BLAST)

001: MAPPIEVSTK SYVEKHVSLP TLNERILSSM SHRSVAAHPW HDLEIGPEAP IIFNCVVEIG KGSKVKYELD KTTGLIKVDR ILYSSVVYPH NYGFIPRTLC
101: EDSDPIDVLV IMQEPVIPGC FLRAKAIGLM PMIDQGEKDD KIIAVCADDP EYRHYNDISE LPPHRMAEIR RFFEDYKKNE NKEVAVNDFL PATAAYDAVQ
201: HSMDLYADYV VENLRR

Arabidopsis Description

PPA4PPa4 [Source:UniProtKB/TrEMBL;Acc:A0A178VKC0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.