Factsheet for HORVU3Hr1G116650.3

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, cytosol

Predictor Summary:

mitochondrion 1
cytosol 1
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, endoplasmic reticulum
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	cytosol
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU3Hr1G116580.1	Barley	cytosol	70.53	97.83
TraesCS3B01G611800.1	Wheat	cytosol	67.71	94.74
TraesCS3D01G539900.1	Wheat	cytosol	66.14	94.2
TraesCS3B01G611600.1	Wheat	golgi	67.4	92.27
TraesCS3A01G534500.1	Wheat	cytosol, plastid	68.03	91.56
TraesCS3A01G534700.1	Wheat	plastid	67.71	91.14
TraesCS3D01G540100.1	Wheat	cytosol, plastid	68.97	83.65
VIT_08s0040g02470.t01	Wine grape	cytosol	56.43	83.33
GSMUA_Achr6P15350_001	Banana	unclear	56.11	83.26
Bra039808.1-P	Field mustard	cytosol	56.43	82.95
CDX73537	Canola	cytosol	56.43	82.95
CDX78192	Canola	cytosol	56.43	82.95
AT3G53620.1	Thale cress	cytosol	56.11	82.87
Solyc09g010380.2.1	Tomato	cytosol	55.8	82.41
Bra007016.1-P	Field mustard	cytosol	55.8	82.03
KRH19727	Soybean	cytosol	55.49	81.94
PGSC0003DMT400023069	Potato	cytosol	55.17	81.48
KRH32318	Soybean	cytosol	54.86	81.02
HORVU1Hr1G005920.4	Barley	cytosol, plastid	60.5	80.75
HORVU6Hr1G068760.1	Barley	cytosol	52.98	78.97
KRG95822	Soybean	cytosol	54.55	75.98
KRH67552	Soybean	cytosol	54.86	75.76
HORVU1Hr1G075660.1	Barley	cytosol	52.66	74.01
GSMUA_Achr3P17710_001	Banana	cytosol, extracellular	38.87	72.09
HORVU1Hr1G075110.1	Barley	plastid	49.84	68.53
HORVU6Hr1G058900.2	Barley	cytosol	23.82	42.22
HORVU2Hr1G065020.1	Barley	cytosol	15.99	36.96
HORVU7Hr1G085380.2	Barley	plastid	14.73	36.43
HORVU6Hr1G080160.1	Barley	plastid	20.69	23.0

Protein Annotations

KEGG:00190+3.6.1.1	Gene3D:3.90.80.10	MapMan:35.1	UniProt:A0A287MTZ1	GO:GO:0000287	GO:GO:0003674
GO:GO:0003824	GO:GO:0004427	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006796	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787
EnsemblPlantsGene:HORVU3Hr1G116650	EnsemblPlants:HORVU3Hr1G116650.3	InterPro:IPR036649	HAMAP:MF_00209	PFAM:PF00719	ScanProsite:PS00387
PANTHER:PTHR10286	PANTHER:PTHR10286:SF40	InterPro:Pyrophosphatase	InterPro:Pyrophosphatase_sf	SUPFAM:SSF50324	SignalP:SignalP-noTM
UniParc:UPI000B4625F6	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chrchr3H:+:696142782..696144513

Molecular Weight (calculated)

34898.6 Da

IEP (calculated)

6.312

GRAVY (calculated)

-0.240

Length

319 amino acids

Sequence
(BLAST)

001: LTPATPGKGQ VSDTHLIFFL LLLCPAPAAD AIAIRRGAGQ TLLSSPHNTT AEQSRAPSLT SLSLRSDQIR SDRVLGSLCF AARSNPSMAP SQEVVAAAAA
101: KEPSTNGNGN GTTAAPKTTS KAPALNERIL SSISRRSVAA HPWHDLEIGP EAPTIFNCVI EIPKGSKVKY ELDKKTGLIK VDRVLYSSVV YPHNYGFIPR
201: TLCDDSDPID VLVIMQEPVV PGCFLRAKAI GLMPMIDQGE ADDKIIAVCA DDPEYRHFND IKELPPHRLA EIRRFFEDYK KNENKEVAVN DFLPSEDAYE
301: AIQHSMDLYA TYICEGLRR

Best Arabidopsis Sequence Match ( AT1G01050.1 )
(BLAST)

001: MSEETKDNQR LQRPAPRLNE RILSSLSRRS VAAHPWHDLE IGPGAPQIFN VVVEITKGSK VKYELDKKTG LIKVDRILYS SVVYPHNYGF VPRTLCEDND
101: PIDVLVIMQE PVLPGCFLRA RAIGLMPMID QGEKDDKIIA VCVDDPEYKH YTDIKELPPH RLSEIRRFFE DYKKNENKEV AVNDFLPSES AVEAIQYSMD
201: LYAEYILHTL RR

Arabidopsis Description

PPA1Soluble inorganic pyrophosphatase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q93V56]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.