Factsheet for TraesCS3D01G540100.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 4
cytosol 2
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytoskeleton, cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	cytoskeleton
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G611800.1	Wheat	cytosol	85.17	98.25
TraesCS3D01G539900.1	Wheat	cytosol	82.89	97.32
TraesCS3A01G534500.1	Wheat	cytosol, plastid	85.55	94.94
HORVU3Hr1G116580.1	Barley	cytosol	82.89	94.78
TraesCS3A01G534700.1	Wheat	plastid	85.17	94.51
TraesCS1D01G040000.1	Wheat	cytosol	71.86	87.1
VIT_08s0040g02470.t01	Wine grape	cytosol	68.82	83.8
Bra039808.1-P	Field mustard	cytosol	68.82	83.41
CDX73537	Canola	cytosol	68.82	83.41
CDX78192	Canola	cytosol	68.82	83.41
Solyc09g010380.2.1	Tomato	cytosol	68.06	82.87
GSMUA_Achr6P15350_001	Banana	unclear	67.68	82.79
Bra007016.1-P	Field mustard	cytosol	68.06	82.49
PGSC0003DMT400023069	Potato	cytosol	67.68	82.41
AT3G53620.1	Thale cress	cytosol	67.3	81.94
KRH19727	Soybean	cytosol	66.54	81.02
KRH32318	Soybean	cytosol	65.78	80.09
TraesCS1D01G344800.2	Wheat	cytosol	61.22	78.54
TraesCS6D01G252400.1	Wheat	cytosol	63.88	78.5
TraesCS2D01G587100.1	Wheat	cytosol	62.36	77.73
TraesCS1D01G273500.1	Wheat	cytosol	62.36	75.93
KRG95822	Soybean	cytosol	65.78	75.55
KRH67552	Soybean	cytosol	66.16	75.32
GSMUA_Achr3P17710_001	Banana	cytosol, extracellular	46.77	71.51
HORVU3Hr1G116650.3	Barley	cytosol, endoplasmic reticulum	83.65	68.97
TraesCS6D01G308400.1	Wheat	plastid	23.95	21.95

Protein Annotations

KEGG:00190+3.6.1.1	Gene3D:3.90.80.10	MapMan:35.1	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824
GO:GO:0004427	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006796	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	InterPro:IPR036649
HAMAP:MF_00209	PFAM:PF00719	ScanProsite:PS00387	PANTHER:PTHR10286	PANTHER:PTHR10286:SF40	InterPro:Pyrophosphatase
InterPro:Pyrophosphatase_sf	SUPFAM:SSF50324	EnsemblPlantsGene:TraesCS3D01G540100	EnsemblPlants:TraesCS3D01G540100.1	TIGR:cd00412	SEG:seg

Description

No Description!

Coordinates

chr3D:-:611566446..611568569

Molecular Weight (calculated)

29303.8 Da

IEP (calculated)

6.789

GRAVY (calculated)

-0.463

Length

263 amino acids

Sequence
(BLAST)

001: MAPSQEVAAP AATATKEPSA NGNGTNGTPA AAPKTKAPAL NERILSSITR RSVAAHPWHD LEIGPDAPTI FNCVSTQPSS SSSRHHQFRP PRKLNHLRNS
101: VQVIEIPKGS KVKYELDKKT GLIKVDRVLY SSVVYPHNYG FIPRTLCDDS DPIDVLVIMQ EPVVPGCFLR AKAIGLMPMI DQGEADDKII AVCADDPEYR
201: HFNDIKELPP HRLAEIRRFF EDYKKNENKE VAVNDFLPSE DAYEAIQHSM DLYATYICEG LRR

Best Arabidopsis Sequence Match ( AT1G01050.1 )
(BLAST)

001: MSEETKDNQR LQRPAPRLNE RILSSLSRRS VAAHPWHDLE IGPGAPQIFN VVVEITKGSK VKYELDKKTG LIKVDRILYS SVVYPHNYGF VPRTLCEDND
101: PIDVLVIMQE PVLPGCFLRA RAIGLMPMID QGEKDDKIIA VCVDDPEYKH YTDIKELPPH RLSEIRRFFE DYKKNENKEV AVNDFLPSES AVEAIQYSMD
201: LYAEYILHTL RR

Arabidopsis Description

PPA1Soluble inorganic pyrophosphatase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q93V56]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.