Factsheet for TraesCS6D01G252400.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 1
mitochondrion 2
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G272300.1	Wheat	cytosol	100.0	100.0
HORVU6Hr1G068760.1	Barley	cytosol	100.0	100.0
TraesCS6B01G299800.1	Wheat	cytosol	99.53	99.53
Os02t0704900-02	Rice	plasma membrane, plastid	94.39	94.39
KXG30923	Sorghum	cytosol	86.92	90.29
Zm00001d051564_P001	Maize	cytosol	79.91	89.06
TraesCS2D01G587100.1	Wheat	cytosol	79.44	80.57
PGSC0003DMT400009045	Potato	cytosol	79.91	79.91
KRH28709	Soybean	nucleus	79.44	79.81
KRH76757	Soybean	cytosol	78.97	79.34
VIT_04s0023g02050.t01	Wine grape	cytosol	79.44	79.07
TraesCS1D01G273500.1	Wheat	cytosol	76.64	75.93
TraesCS1D01G040000.1	Wheat	cytosol	76.64	75.58
TraesCS1D01G344800.2	Wheat	cytosol	71.5	74.63
TraesCS3D01G539900.1	Wheat	cytosol	78.04	74.55
CDY46306	Canola	cytosol	73.36	71.69
AT2G18230.1	Thale cress	cytosol	72.9	71.56
CDY30321	Canola	cytosol	72.9	71.23
CDY64108	Canola	cytosol	72.9	71.23
Bra037229.1-P	Field mustard	cytosol	72.9	71.23
CDY25149	Canola	cytosol	73.36	67.38
Solyc02g085050.2.1	Tomato	cytosol	80.84	64.55
TraesCS3D01G540100.1	Wheat	cytosol, plastid	78.5	63.88
GSMUA_Achr5P23650_001	Banana	extracellular	83.64	59.47
Zm00001d017770_P001	Maize	mitochondrion	86.45	58.36
Bra039627.1-P	Field mustard	plastid	73.36	23.02
TraesCS6D01G308400.1	Wheat	plastid	27.1	20.21

Protein Annotations

KEGG:00190+3.6.1.1	Gene3D:3.90.80.10	MapMan:35.1	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824
GO:GO:0004427	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006796	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	InterPro:IPR036649
HAMAP:MF_00209	PFAM:PF00719	ScanProsite:PS00387	PANTHER:PTHR10286	PANTHER:PTHR10286:SF10	InterPro:Pyrophosphatase
InterPro:Pyrophosphatase_sf	SUPFAM:SSF50324	EnsemblPlantsGene:TraesCS6D01G252400	EnsemblPlants:TraesCS6D01G252400.1	TIGR:cd00412	:

Description

No Description!

Coordinates

chr6D:-:356598197..356600361

Molecular Weight (calculated)

24288.2 Da

IEP (calculated)

5.363

GRAVY (calculated)

-0.342

Length

214 amino acids

Sequence
(BLAST)

001: MAGEADGKTY QVSRMPPAAL NERILSSMSQ KHVAAHPWHD LEIGPGAPAV FNCVVEIPRG SKVKYELDKA TGLIKVDRVL YSSVVYPHNY GFIPRTLCED
101: NDPMDVLVLM QEQVVPGCFL RARAIGLMPM IDQGEKDDKI IAVCADDPEY RHFRDISELP PHRLQEIRRF FEDYKKNENK EVAVNDFLPA EDAINAIKYS
201: MDLYGSYIME GLRK

Best Arabidopsis Sequence Match ( AT1G01050.1 )
(BLAST)

001: MSEETKDNQR LQRPAPRLNE RILSSLSRRS VAAHPWHDLE IGPGAPQIFN VVVEITKGSK VKYELDKKTG LIKVDRILYS SVVYPHNYGF VPRTLCEDND
101: PIDVLVIMQE PVLPGCFLRA RAIGLMPMID QGEKDDKIIA VCVDDPEYKH YTDIKELPPH RLSEIRRFFE DYKKNENKEV AVNDFLPSES AVEAIQYSMD
201: LYAEYILHTL RR

Arabidopsis Description

PPA1Soluble inorganic pyrophosphatase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q93V56]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.