CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 1
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os02t0704900-02	Rice	plasma membrane, plastid	90.78	87.38
TraesCS6D01G252400.1	Wheat	cytosol	90.29	86.92
TraesCS6A01G272300.1	Wheat	cytosol	90.29	86.92
HORVU6Hr1G068760.1	Barley	cytosol	90.29	86.92
TraesCS6B01G299800.1	Wheat	cytosol	89.81	86.45
VIT_04s0023g02050.t01	Wine grape	cytosol	84.47	80.93
PGSC0003DMT400009045	Potato	cytosol	83.01	79.91
KRH28709	Soybean	nucleus	81.55	78.87
KRH76757	Soybean	cytosol	81.07	78.4
EER94266	Sorghum	cytosol	76.7	77.45
KXG27493	Sorghum	cytosol	79.13	76.17
EES18902	Sorghum	cytosol	78.64	75.7
EES18298	Sorghum	cytosol	79.61	71.62
AT2G18230.1	Thale cress	cytosol	75.24	71.1
CDY46306	Canola	cytosol	75.24	70.78
Bra037229.1-P	Field mustard	cytosol	74.76	70.32
CDY64108	Canola	cytosol	74.76	70.32
CDY30321	Canola	cytosol	74.76	70.32
OQU87920	Sorghum	cytosol	54.37	67.88
CDY25149	Canola	cytosol	75.24	66.52
Solyc02g085050.2.1	Tomato	cytosol	83.98	64.55
Zm00001d017770_P001	Maize	mitochondrion	95.63	62.15
GSMUA_Achr5P23650_001	Banana	extracellular	87.38	59.8
Bra039627.1-P	Field mustard	plastid	75.24	22.73
EES05862	Sorghum	plastid	28.16	20.14

Protein Annotations

KEGG:00190+3.6.1.1	Gene3D:3.90.80.10	MapMan:35.1	UniProt:A0A194YRR2	GO:GO:0000287	GO:GO:0003674
GO:GO:0003824	GO:GO:0004427	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006796	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787
InterPro:IPR036649	EnsemblPlants:KXG30923	ProteinID:KXG30923	ProteinID:KXG30923.1	HAMAP:MF_00209	PFAM:PF00719
ScanProsite:PS00387	PANTHER:PTHR10286	PANTHER:PTHR10286:SF40	MetaCyc:PWY-7805	MetaCyc:PWY-7807	InterPro:Pyrophosphatase
InterPro:Pyrophosphatase_sf	EnsemblPlantsGene:SORBI_3004G268000	SUPFAM:SSF50324	UniParc:UPI0001C80C1F	:	:

Description

hypothetical protein

Coordinates

chr4:+:61203077..61207594

Molecular Weight (calculated)

23416.3 Da

IEP (calculated)

5.634

GRAVY (calculated)

-0.229

Length

206 amino acids

Sequence
(BLAST)

001: MFVKAMAGPG VLNERILSSM SQKHVAAHPW HDLEIGPGAP EVFNCVVEIP RGSKVKYELD KASGLIKVDR VLYSSVVYPH NYGFIPRTLC EDSDPMDVLI
101: LMQEQVVPGC FLRARAIGLM PMIDQGEKDD KIIAVCADDP EFRHYTDITD LPPHRLQEIR RFFEDYKKNE NKEVAVNEFL PAKDAINAIK YSMDLYGSYI
201: IESLRK

Best Arabidopsis Sequence Match ( AT3G53620.1 )
(BLAST)

001: MAPPIEVSTK SYVEKHVSLP TLNERILSSM SHRSVAAHPW HDLEIGPEAP IIFNCVVEIG KGSKVKYELD KTTGLIKVDR ILYSSVVYPH NYGFIPRTLC
101: EDSDPIDVLV IMQEPVIPGC FLRAKAIGLM PMIDQGEKDD KIIAVCADDP EYRHYNDISE LPPHRMAEIR RFFEDYKKNE NKEVAVNDFL PATAAYDAVQ
201: HSMDLYADYV VENLRR

Arabidopsis Description

PPA4PPa4 [Source:UniProtKB/TrEMBL;Acc:A0A178VKC0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.