CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d018197_P001	Maize	plastid	96.88	96.88
TraesCS6D01G308400.1	Wheat	plastid	90.62	90.94
HORVU6Hr1G080160.1	Barley	plastid	89.93	90.24
TraesCS6B01G360300.1	Wheat	plastid	89.58	89.9
TraesCS6A01G329500.1	Wheat	golgi	89.58	89.9
GSMUA_Achr6P30130_001	Banana	cytosol	55.9	88.46
GSMUA_Achr9P26260_001	Banana	cytosol	54.86	86.81
Os02t0768600-01	Rice	plastid	86.81	85.03
CDY71464	Canola	plastid	70.49	76.6
KRH10663	Soybean	nucleus	72.92	72.92
KRH21683	Soybean	nucleus	72.57	72.57
PGSC0003DMT400008028	Potato	extracellular	72.57	72.07
Solyc01g106430.2.1	Tomato	plastid	72.22	71.72
PGSC0003DMT400068875	Potato	cytosol	71.88	70.89
Solyc10g047950.1.1	Tomato	plastid	71.18	69.73
Bra006029.1-P	Field mustard	plastid	71.53	69.59
CDY56549	Canola	plastid	71.18	69.26
CDX81134	Canola	plastid	70.83	69.15
CDX69894	Canola	plastid	70.49	68.12
Bra009396.1-P	Field mustard	plastid	70.14	67.79
CDY21593	Canola	plastid	69.44	67.57
AT5G09650.1	Thale cress	mitochondrion	69.79	67.0
CDX85804	Canola	plastid	65.28	66.67
CDY44812	Canola	cytosol	36.11	65.82
CDX81136	Canola	cytosol	17.01	64.47
VIT_03s0088g01290.t01	Wine grape	plastid	29.86	57.33
VIT_18s0001g08170.t01	Wine grape	cytosol	56.6	53.62
Bra028625.1-P	Field mustard	plastid	28.47	49.4
KXG30923	Sorghum	cytosol	20.14	28.16
EES18902	Sorghum	cytosol	20.83	28.04
EER94266	Sorghum	cytosol	19.79	27.94
KXG27493	Sorghum	cytosol	20.49	27.57
EES18298	Sorghum	cytosol	20.83	26.2
OQU87920	Sorghum	cytosol	13.54	23.64

Protein Annotations

KEGG:00190+3.6.1.1	Gene3D:3.90.80.10	MapMan:50.3.6	EntrezGene:8078934	UniProt:C5XSW9	EnsemblPlants:EES05862
ProteinID:EES05862	ProteinID:EES05862.1	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824	GO:GO:0004427
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006796
GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0009507	GO:GO:0009536	GO:GO:0009570
GO:GO:0009579	GO:GO:0009605	GO:GO:0009607	GO:GO:0009628	GO:GO:0009651	GO:GO:0009941
GO:GO:0009987	GO:GO:0016787	GO:GO:0042742	GO:GO:0046686	InterPro:IPR036649	PFAM:PF00719
ScanProsite:PS00387	PANTHER:PTHR10286	PANTHER:PTHR10286:SF39	MetaCyc:PWY-7805	MetaCyc:PWY-7807	InterPro:Pyrophosphatase
InterPro:Pyrophosphatase_sf	EnsemblPlantsGene:SORBI_3004G311100	SUPFAM:SSF50324	unigene:Sbi.1225	UniParc:UPI0001A859D9	RefSeq:XP_002452886.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr4:+:64785187..64790055

Molecular Weight (calculated)

31737.6 Da

IEP (calculated)

5.860

GRAVY (calculated)

-0.401

Length

288 amino acids

Sequence
(BLAST)

001: MATAATASAT AATRFTLLAG AGLRSRISRR PTAVRFQRQR GLTTTALLKT ADLLPKAQGQ PETLDYRVFL VDGGGRKVSP WHDVPLRAGD GVFHFVVEIP
101: KESSAKMEVA TDEAFTPIKQ DTKKGNLRYY PYNINWNYGL LPQTWEDPTS ANSDVEGAFG DNDPVDVVEI GERRANIGDV LKVKPLAALA MIDEGELDWK
201: IVAISLDDPK ASLVNDVDDV EKHFPGTLTA IRDWFRDYKI PDGKPANRFG LGNKPASKEY ALKVIEETNE SWEKLVKRNI PAGELSLA

Best Arabidopsis Sequence Match ( AT5G09650.1 )
(BLAST)

001: MAATRVLTAA TAVTQTTSCF LAKQAFTLPA KKSCGGFGGL CFSRRALVLK SKRPFSCSAI YNPQVKVQEE GPAESLDYRV FFLDGSGKKV SPWHDIPLTL
101: GDGVFNFIVE IPKESKAKME VATDEDFTPI KQDTKKGKLR YYPYNINWNY GLLPQTWEDP SHANSEVEGC FGDNDPVDVV EIGETQRKIG DILKIKPLAA
201: LAMIDEGELD WKIVAISLDD PKAHLVNDVE DVEKHFPGTL TAIRDWFRDY KIPDGKPANR FGLGDKPANK DYALKIIQET NESWAKLVKR SVDAGDLSLY

Arabidopsis Description

PPA6Soluble inorganic pyrophosphatase 6, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LXC9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.