Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX69894 | Canola | plastid | 98.31 | 97.65 |
| Bra009396.1-P | Field mustard | plastid | 97.97 | 97.32 |
| CDY71464 | Canola | plastid | 83.45 | 93.21 |
| CDX81134 | Canola | plastid | 91.89 | 92.2 |
| CDY56549 | Canola | plastid | 91.55 | 91.55 |
| AT5G09650.1 | Thale cress | mitochondrion | 91.55 | 90.33 |
| CDX85804 | Canola | plastid | 85.81 | 90.07 |
| GSMUA_Achr9P26260_001 | Banana | cytosol | 55.07 | 89.56 |
| GSMUA_Achr6P30130_001 | Banana | cytosol | 54.05 | 87.91 |
| CDY44812 | Canola | cytosol | 43.58 | 81.65 |
| PGSC0003DMT400008028 | Potato | extracellular | 76.35 | 77.93 |
| Solyc01g106430.2.1 | Tomato | plastid | 76.01 | 77.59 |
| KRH21683 | Soybean | nucleus | 75.0 | 77.08 |
| KRH10663 | Soybean | nucleus | 75.0 | 77.08 |
| PGSC0003DMT400068875 | Potato | cytosol | 75.34 | 76.37 |
| Solyc10g047950.1.1 | Tomato | plastid | 75.0 | 75.51 |
| CDX81136 | Canola | cytosol | 18.92 | 73.68 |
| HORVU6Hr1G080160.1 | Barley | plastid | 67.91 | 70.03 |
| TraesCS6D01G308400.1 | Wheat | plastid | 67.57 | 69.69 |
| Zm00001d018197_P001 | Maize | plastid | 67.57 | 69.44 |
| EES05862 | Sorghum | plastid | 67.57 | 69.44 |
| TraesCS6B01G360300.1 | Wheat | plastid | 67.23 | 69.34 |
| TraesCS6A01G329500.1 | Wheat | golgi | 67.23 | 69.34 |
| Os02t0768600-01 | Rice | plastid | 65.88 | 66.33 |
| VIT_03s0088g01290.t01 | Wine grape | plastid | 31.76 | 62.67 |
| VIT_18s0001g08170.t01 | Wine grape | cytosol | 57.09 | 55.59 |
| CDX90003 | Canola | cytosol | 21.62 | 30.19 |
| CDY55328 | Canola | cytosol | 20.95 | 30.1 |
| CDY32448 | Canola | cytosol | 20.95 | 30.1 |
| CDX97250 | Canola | cytosol | 21.62 | 29.91 |
| CDY01933 | Canola | cytosol | 21.62 | 29.91 |
| CDY15206 | Canola | cytosol | 20.95 | 29.67 |
| CDY48009 | Canola | cytosol | 21.28 | 29.17 |
| CDY27516 | Canola | cytosol | 21.28 | 29.17 |
| CDX78192 | Canola | cytosol | 21.28 | 29.03 |
| CDX73537 | Canola | cytosol | 21.28 | 29.03 |
| CDY07141 | Canola | cytosol | 20.95 | 28.97 |
| CDY46306 | Canola | cytosol | 20.61 | 27.85 |
| CDY30321 | Canola | cytosol | 20.27 | 27.4 |
| CDY64108 | Canola | cytosol | 20.27 | 27.4 |
| CDY25149 | Canola | cytosol | 20.61 | 26.18 |
| CDY69447 | Canola | cytosol | 6.76 | 25.32 |
Protein Annotations
| KEGG:00190+3.6.1.1 | Gene3D:3.90.80.10 | MapMan:50.3.6 | GO:A0A078GA69 | UniProt:A0A078GA69 | EnsemblPlants:CDY21593 |
| ProteinID:CDY21593 | ProteinID:CDY21593.1 | GO:GO:0000287 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004427 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006796 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016787 | EnsemblPlantsGene:GSBRNA2T00016060001 | InterPro:IPR036649 |
| PFAM:PF00719 | ScanProsite:PS00387 | PANTHER:PTHR10286 | PANTHER:PTHR10286:SF39 | InterPro:Pyrophosphatase | InterPro:Pyrophosphatase_sf |
| SUPFAM:SSF50324 | UniParc:UPI0004EBB4E3 | SEG:seg | : | : | : |
Description
BnaC09g46990DBnaC09g46990D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GA69]
Coordinates
chrLK032122:-:394266..395954
Molecular Weight (calculated)
33039.2 Da
IEP (calculated)
5.486
GRAVY (calculated)
-0.411
Length
296 amino acids
Sequence
(BLAST)
(BLAST)
001: MAATRVLTAA AATTQPTSCF LSKRAFLLPA KTSCLSFNRR ALVLKSKQPF SCSAIYNPQT KVQEEGPSET LDYRVFFLDG SSGKKVSPWH DIPLTLGDGV
101: FNFIVEIPKE SKAKMEVATD EDYTPIKQDT KKGKLRYYPY NINWNYGLLP QTWEDPSQAN PEVEGAFGDN DPVDVVEIGE AQRKIGEVLK IKPLAALAMI
201: DEGELDWKIV AISLDDPKAH LVNDVDDVEK HFPGTLTAIR DWFRDYKIPD GKPANRFGLG DKPANKDYAL KIIHETNESW AKLVKRSVDA GDLSLF
101: FNFIVEIPKE SKAKMEVATD EDYTPIKQDT KKGKLRYYPY NINWNYGLLP QTWEDPSQAN PEVEGAFGDN DPVDVVEIGE AQRKIGEVLK IKPLAALAMI
201: DEGELDWKIV AISLDDPKAH LVNDVDDVEK HFPGTLTAIR DWFRDYKIPD GKPANRFGLG DKPANKDYAL KIIHETNESW AKLVKRSVDA GDLSLF
001: MAATRVLTAA TAVTQTTSCF LAKQAFTLPA KKSCGGFGGL CFSRRALVLK SKRPFSCSAI YNPQVKVQEE GPAESLDYRV FFLDGSGKKV SPWHDIPLTL
101: GDGVFNFIVE IPKESKAKME VATDEDFTPI KQDTKKGKLR YYPYNINWNY GLLPQTWEDP SHANSEVEGC FGDNDPVDVV EIGETQRKIG DILKIKPLAA
201: LAMIDEGELD WKIVAISLDD PKAHLVNDVE DVEKHFPGTL TAIRDWFRDY KIPDGKPANR FGLGDKPANK DYALKIIQET NESWAKLVKR SVDAGDLSLY
101: GDGVFNFIVE IPKESKAKME VATDEDFTPI KQDTKKGKLR YYPYNINWNY GLLPQTWEDP SHANSEVEGC FGDNDPVDVV EIGETQRKIG DILKIKPLAA
201: LAMIDEGELD WKIVAISLDD PKAHLVNDVE DVEKHFPGTL TAIRDWFRDY KIPDGKPANR FGLGDKPANK DYALKIIQET NESWAKLVKR SVDAGDLSLY
Arabidopsis Description
PPA6Soluble inorganic pyrophosphatase 6, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LXC9]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.