Factsheet for Bra009396.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX69894	Canola	plastid	98.66	98.66
CDY21593	Canola	plastid	97.32	97.97
Bra006029.1-P	Field mustard	plastid	91.61	92.23
AT5G09650.1	Thale cress	mitochondrion	90.27	89.67
GSMUA_Achr9P26260_001	Banana	cytosol	54.36	89.01
GSMUA_Achr6P30130_001	Banana	cytosol	53.36	87.36
KRH21683	Soybean	nucleus	75.84	78.47
KRH10663	Soybean	nucleus	75.84	78.47
PGSC0003DMT400008028	Potato	extracellular	76.17	78.28
Solyc01g106430.2.1	Tomato	plastid	75.84	77.93
Bra028625.1-P	Field mustard	plastid	43.29	77.71
PGSC0003DMT400068875	Potato	cytosol	75.5	77.05
Solyc10g047950.1.1	Tomato	plastid	75.17	76.19
HORVU6Hr1G080160.1	Barley	plastid	67.79	70.38
EES05862	Sorghum	plastid	67.79	70.14
TraesCS6D01G308400.1	Wheat	plastid	67.45	70.03
Zm00001d018197_P001	Maize	plastid	67.45	69.79
TraesCS6A01G329500.1	Wheat	golgi	67.11	69.69
TraesCS6B01G360300.1	Wheat	plastid	67.11	69.69
Os02t0768600-01	Rice	plastid	65.77	66.67
VIT_03s0088g01290.t01	Wine grape	plastid	32.21	64.0
VIT_18s0001g08170.t01	Wine grape	cytosol	57.05	55.92
Bra033292.1-P	Field mustard	cytosol	21.48	30.19
Bra032616.1-P	Field mustard	cytosol	20.47	30.05
Bra008551.1-P	Field mustard	cytosol	21.48	29.91
Bra039808.1-P	Field mustard	cytosol	21.48	29.49
Bra040479.1-P	Field mustard	cytosol	21.14	29.17
Bra037416.1-P	Field mustard	cytosol	20.81	28.97
Bra007016.1-P	Field mustard	cytosol	20.81	28.57
Bra037229.1-P	Field mustard	cytosol	20.13	27.4
Bra039627.1-P	Field mustard	plastid	20.47	8.94

Protein Annotations

KEGG:00190+3.6.1.1	Gene3D:3.90.80.10	MapMan:50.3.6	EnsemblPlantsGene:Bra009396	EnsemblPlants:Bra009396.1	EnsemblPlants:Bra009396.1-P
GO:GO:0000287	GO:GO:0003674	GO:GO:0003824	GO:GO:0004427	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006796	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016787	InterPro:IPR036649	UniProt:M4CYU9	PFAM:PF00719	ScanProsite:PS00387
PANTHER:PTHR10286	PANTHER:PTHR10286:SF39	InterPro:Pyrophosphatase	InterPro:Pyrophosphatase_sf	SUPFAM:SSF50324	UniParc:UPI0002547679
SEG:seg	:	:	:	:	:

Description

AT5G09650 (E=9e-149) AtPPa6 | AtPPa6 (Arabidopsis thaliana pyrophosphorylase 6); inorganic diphosphatase/ pyrophosphatase

Coordinates

chrA10:-:16462828..16464224

Molecular Weight (calculated)

33308.5 Da

IEP (calculated)

5.799

GRAVY (calculated)

-0.413

Length

298 amino acids

Sequence
(BLAST)

001: MAATRVLTAA AATTQPTSCF LSKRAFLLPA KTSSFALSFN RRALVLKSKR TFSCSAIYNP QTKVQEEGQS ETLDYRVFFL DGGSGKKVSP WHDIPLTLGD
101: GVFNFIVEIP KESKAKMEVA TDEDYTPIKQ DTKKGKLRYY PYNINWNYGL LPQTWEDPSQ ANPEVEGAFG DNDPVDVVEI GEAQRKIGEV LKIKPLAALA
201: MIDEGELDWK IVAISLDDPK AHFVNDVDDV EKHFPGTLTA IRDWFRDYKI PDGKPANRFG LGDKPANKDY ALKIIHETNE SWAKLVKRSV DAGDLSLF

Best Arabidopsis Sequence Match ( AT5G09650.1 )
(BLAST)

001: MAATRVLTAA TAVTQTTSCF LAKQAFTLPA KKSCGGFGGL CFSRRALVLK SKRPFSCSAI YNPQVKVQEE GPAESLDYRV FFLDGSGKKV SPWHDIPLTL
101: GDGVFNFIVE IPKESKAKME VATDEDFTPI KQDTKKGKLR YYPYNINWNY GLLPQTWEDP SHANSEVEGC FGDNDPVDVV EIGETQRKIG DILKIKPLAA
201: LAMIDEGELD WKIVAISLDD PKAHLVNDVE DVEKHFPGTL TAIRDWFRDY KIPDGKPANR FGLGDKPANK DYALKIIQET NESWAKLVKR SVDAGDLSLY

Arabidopsis Description

PPA6Soluble inorganic pyrophosphatase 6, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LXC9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.