Factsheet for HORVU6Hr1G080160.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 3
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G308400.1	Wheat	plastid	98.61	98.61
TraesCS6A01G329500.1	Wheat	golgi	97.91	97.91
TraesCS6B01G360300.1	Wheat	plastid	97.56	97.56
EES05862	Sorghum	plastid	90.24	89.93
Zm00001d018197_P001	Maize	plastid	88.5	88.19
GSMUA_Achr9P26260_001	Banana	cytosol	54.7	86.26
GSMUA_Achr6P30130_001	Banana	cytosol	54.36	85.71
Os02t0768600-01	Rice	plastid	83.28	81.29
CDY71464	Canola	plastid	70.73	76.6
KRH21683	Soybean	nucleus	70.73	70.49
KRH10663	Soybean	nucleus	70.73	70.49
PGSC0003DMT400068875	Potato	cytosol	70.73	69.52
Bra006029.1-P	Field mustard	plastid	71.43	69.26
Solyc01g106430.2.1	Tomato	plastid	69.69	68.97
PGSC0003DMT400008028	Potato	extracellular	69.69	68.97
CDY56549	Canola	plastid	71.08	68.92
CDX81134	Canola	plastid	70.73	68.81
Solyc10g047950.1.1	Tomato	plastid	70.38	68.71
CDX69894	Canola	plastid	70.73	68.12
CDY21593	Canola	plastid	70.03	67.91
Bra009396.1-P	Field mustard	plastid	70.38	67.79
AT5G09650.1	Thale cress	mitochondrion	68.99	66.0
CDX85804	Canola	plastid	64.81	65.96
CDY44812	Canola	cytosol	36.24	65.82
CDX81136	Canola	cytosol	16.38	61.84
VIT_03s0088g01290.t01	Wine grape	plastid	29.27	56.0
VIT_18s0001g08170.t01	Wine grape	cytosol	55.05	51.97
Bra028625.1-P	Field mustard	plastid	28.92	50.0
HORVU3Hr1G116580.1	Barley	cytosol	22.65	28.26
HORVU6Hr1G068760.1	Barley	cytosol	20.21	27.1
HORVU1Hr1G075110.1	Barley	plastid	21.25	26.29
HORVU1Hr1G005920.4	Barley	cytosol, plastid	21.6	25.94
HORVU1Hr1G075660.1	Barley	cytosol	20.21	25.55
HORVU3Hr1G116650.3	Barley	cytosol, endoplasmic reticulum	23.0	20.69
HORVU7Hr1G085380.2	Barley	plastid	8.01	17.83
HORVU6Hr1G058900.2	Barley	cytosol	10.45	16.67
HORVU2Hr1G065020.1	Barley	cytosol	7.32	15.22

Protein Annotations

KEGG:00190+3.6.1.1	Gene3D:3.90.80.10	MapMan:50.3.6	EMBL:AK355636	UniProt:F2CVI3	GO:GO:0000287
GO:GO:0003674	GO:GO:0003824	GO:GO:0004427	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006796	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152
GO:GO:0009507	GO:GO:0009536	GO:GO:0009570	GO:GO:0009579	GO:GO:0009605	GO:GO:0009607
GO:GO:0009628	GO:GO:0009651	GO:GO:0009941	GO:GO:0009987	GO:GO:0016787	GO:GO:0042742
GO:GO:0046686	EnsemblPlantsGene:HORVU6Hr1G080160	EnsemblPlants:HORVU6Hr1G080160.1	InterPro:IPR036649	PFAM:PF00719	ScanProsite:PS00387
PANTHER:PTHR10286	PANTHER:PTHR10286:SF39	InterPro:Pyrophosphatase	InterPro:Pyrophosphatase_sf	SUPFAM:SSF50324	UniParc:UPI00020049D1
SEG:seg	:	:	:	:	:

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2CVI3]

Coordinates

chrchr6H:+:540207325..540211438

Molecular Weight (calculated)

31850.7 Da

IEP (calculated)

5.290

GRAVY (calculated)

-0.482

Length

287 amino acids

Sequence
(BLAST)

001: MATAVTASAT AATRFTRLAG VGLRRSSYRP RTAVRFQRPG LTTTALLRPT ELKPKDQGQP ETLDYRVFLI DGGGRKVSPW HDVPLRAGDG AFHFIVEIPK
101: ESSAKMEVAT DEAYTPIKQD TKKGNLRYYP YNINWNYGLL PQTWEDPTAA NADVEGALGD NDPVDVVEIG ERRANIGDVL RVKPLAALAM IDEGELDWKI
201: VAISLDDPKA SLVNDVDDVE EHFPGTLTAI RDWFRDYKIP DGKPANRFGL GDKPTSKEYA LKVIEETNES WEKLVKRKIP AGELSLA

Best Arabidopsis Sequence Match ( AT5G09650.1 )
(BLAST)

001: MAATRVLTAA TAVTQTTSCF LAKQAFTLPA KKSCGGFGGL CFSRRALVLK SKRPFSCSAI YNPQVKVQEE GPAESLDYRV FFLDGSGKKV SPWHDIPLTL
101: GDGVFNFIVE IPKESKAKME VATDEDFTPI KQDTKKGKLR YYPYNINWNY GLLPQTWEDP SHANSEVEGC FGDNDPVDVV EIGETQRKIG DILKIKPLAA
201: LAMIDEGELD WKIVAISLDD PKAHLVNDVE DVEKHFPGTL TAIRDWFRDY KIPDGKPANR FGLGDKPANK DYALKIIQET NESWAKLVKR SVDAGDLSLY

Arabidopsis Description

PPA6Soluble inorganic pyrophosphatase 6, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LXC9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.