Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G355800.1 | Wheat | cytosol | 86.34 | 95.61 |
| TraesCS1A01G342700.1 | Wheat | cytosol | 85.46 | 94.63 |
| TraesCS1D01G344800.2 | Wheat | cytosol | 85.02 | 94.15 |
| Os10t0406100-01 | Rice | cytosol | 81.5 | 90.69 |
| EER94266 | Sorghum | cytosol | 78.41 | 87.25 |
| Bra032616.1-P | Field mustard | cytosol | 74.45 | 83.25 |
| PGSC0003DMT400015012 | Potato | cytosol | 68.28 | 81.15 |
| Solyc08g013680.2.1 | Tomato | cytosol | 39.65 | 81.08 |
| AT1G01050.1 | Thale cress | cytosol | 75.33 | 80.66 |
| Bra033292.1-P | Field mustard | cytosol | 74.89 | 80.19 |
| Solyc08g083370.2.1 | Tomato | cytosol | 72.25 | 80.0 |
| KRH47754 | Soybean | cytosol | 74.01 | 79.25 |
| Bra008551.1-P | Field mustard | cytosol | 74.45 | 78.97 |
| KRH68981 | Soybean | cytosol | 73.13 | 78.67 |
| KRG97263 | Soybean | cytosol | 73.13 | 78.67 |
| PGSC0003DMT400012843 | Potato | extracellular | 72.25 | 77.73 |
| Bra037416.1-P | Field mustard | cytosol | 73.13 | 77.57 |
| Solyc12g055830.1.1 | Tomato | extracellular | 72.69 | 77.46 |
| AT4G01480.1 | Thale cress | cytosol | 73.57 | 77.31 |
| AT2G46860.1 | Thale cress | cytosol | 73.57 | 77.31 |
| VIT_02s0025g02980.t01 | Wine grape | cytosol | 72.69 | 77.1 |
| Bra040479.1-P | Field mustard | cytosol | 73.13 | 76.85 |
| PGSC0003DMT400031865 | Potato | cytosol | 68.72 | 73.58 |
| HORVU6Hr1G068760.1 | Barley | cytosol | 69.16 | 73.36 |
| HORVU3Hr1G116580.1 | Barley | cytosol | 73.57 | 72.61 |
| KRG98973 | Soybean | cytosol | 62.11 | 71.94 |
| KRH06335 | Soybean | cytosol | 68.72 | 69.96 |
| HORVU1Hr1G075110.1 | Barley | plastid | 70.48 | 68.97 |
| HORVU1Hr1G005920.4 | Barley | cytosol, plastid | 70.04 | 66.53 |
| KRG99305 | Soybean | cytosol | 54.19 | 61.19 |
| KRH72403 | Soybean | cytosol | 36.12 | 60.74 |
| KRG88877 | Soybean | cytosol | 30.4 | 60.0 |
| HORVU3Hr1G116650.3 | Barley | cytosol, endoplasmic reticulum | 74.01 | 52.66 |
| HORVU6Hr1G058900.2 | Barley | cytosol | 33.48 | 42.22 |
| HORVU7Hr1G085380.2 | Barley | plastid | 22.03 | 38.76 |
| HORVU2Hr1G065020.1 | Barley | cytosol | 21.15 | 34.78 |
| HORVU6Hr1G080160.1 | Barley | plastid | 25.55 | 20.21 |
Protein Annotations
| KEGG:00190+3.6.1.1 | Gene3D:3.90.80.10 | MapMan:35.1 | UniProt:A0A287GA24 | GO:GO:0000287 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004427 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0006796 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016787 |
| EnsemblPlantsGene:HORVU1Hr1G075660 | EnsemblPlants:HORVU1Hr1G075660.1 | InterPro:IPR036649 | HAMAP:MF_00209 | PFAM:PF00719 | ScanProsite:PS00387 |
| PANTHER:PTHR10286 | PANTHER:PTHR10286:SF11 | InterPro:Pyrophosphatase | InterPro:Pyrophosphatase_sf | SUPFAM:SSF50324 | UniParc:UPI000B461479 |
Description
No Description!
Coordinates
chrchr1H:-:511812021..511814069
Molecular Weight (calculated)
25987.2 Da
IEP (calculated)
6.251
GRAVY (calculated)
-0.410
Length
227 amino acids
Sequence
(BLAST)
(BLAST)
001: SWSFLSAIQI NSYRNLGADC RTMADDKKDN PKLNQRIVSS LSKRTVAAHS WHDLEIGPEA PQIFNVVVEI TKGSKVKYEL DKKTGMIKVD RILYSSVVYP
101: HNYGFVPRTL CEDGDPIDVL VLMQEPVIPG CFLRAKAIGL MPMIDQGEKD DKIIAVCVDD PEYRHFNDLK ELSPHRLAEI RRFFEDYKKN ENKEVAVNDF
201: LPPNTAQEAI KHSMDLYAEY ILQSLRN
101: HNYGFVPRTL CEDGDPIDVL VLMQEPVIPG CFLRAKAIGL MPMIDQGEKD DKIIAVCVDD PEYRHFNDLK ELSPHRLAEI RRFFEDYKKN ENKEVAVNDF
201: LPPNTAQEAI KHSMDLYAEY ILQSLRN
001: MSEETKDNQR LQRPAPRLNE RILSSLSRRS VAAHPWHDLE IGPGAPQIFN VVVEITKGSK VKYELDKKTG LIKVDRILYS SVVYPHNYGF VPRTLCEDND
101: PIDVLVIMQE PVLPGCFLRA RAIGLMPMID QGEKDDKIIA VCVDDPEYKH YTDIKELPPH RLSEIRRFFE DYKKNENKEV AVNDFLPSES AVEAIQYSMD
201: LYAEYILHTL RR
101: PIDVLVIMQE PVLPGCFLRA RAIGLMPMID QGEKDDKIIA VCVDDPEYKH YTDIKELPPH RLSEIRRFFE DYKKNENKEV AVNDFLPSES AVEAIQYSMD
201: LYAEYILHTL RR
Arabidopsis Description
PPA1Soluble inorganic pyrophosphatase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q93V56]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.