CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EER92590
EER94266
EES18298
KXG27493
OQU81040
OQU87920

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G01480.1	EER94266	AT1G01050.1	21798944
AT4G01480.1	EES18298	AT1G01050.1	21798944
AT4G01480.1	KXG27493	AT1G01050.1	21798944
AT4G01480.1	OQU87920	AT1G01050.1	21798944
AT4G01480.1	EER92590	AT2G32840.1	21798944
AT4G01480.1	OQU81040	AT5G65683.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os10t0406100-01	Rice	cytosol	91.18	91.18
TraesCS1A01G342700.1	Wheat	cytosol	86.27	85.85
TraesCS1D01G344800.2	Wheat	cytosol	85.78	85.37
TraesCS1B01G355800.1	Wheat	cytosol	85.78	85.37
PGSC0003DMT400015012	Potato	cytosol	78.92	84.29
Bra032616.1-P	Field mustard	cytosol	83.82	84.24
KRH47754	Soybean	cytosol	86.76	83.49
Solyc08g013680.2.1	Tomato	cytosol	45.1	82.88
AT1G01050.1	Thale cress	cytosol	85.29	82.08
KRH68981	Soybean	cytosol	84.8	81.99
Solyc08g083370.2.1	Tomato	cytosol	82.35	81.95
Bra008551.1-P	Field mustard	cytosol	85.78	81.78
Bra033292.1-P	Field mustard	cytosol	84.8	81.6
KXG27493	Sorghum	cytosol	85.29	81.31
Bra037416.1-P	Field mustard	cytosol	84.8	80.84
KRG97263	Soybean	cytosol	83.33	80.57
AT2G46860.1	Thale cress	cytosol	85.29	80.56
PGSC0003DMT400012843	Potato	extracellular	82.84	80.09
Solyc12g055830.1.1	Tomato	extracellular	83.33	79.81
Bra040479.1-P	Field mustard	cytosol	84.31	79.63
AT4G01480.1	Thale cress	cytosol	83.33	78.7
VIT_02s0025g02980.t01	Wine grape	cytosol	82.35	78.5
HORVU1Hr1G075660.1	Barley	cytosol	87.25	78.41
EES18902	Sorghum	cytosol	81.37	77.57
KXG30923	Sorghum	cytosol	77.45	76.7
PGSC0003DMT400031865	Potato	cytosol	79.41	76.42
EES18298	Sorghum	cytosol	83.82	74.67
KRH06335	Soybean	cytosol	80.39	73.54
KRG98973	Soybean	cytosol	70.59	73.47
OQU87920	Sorghum	cytosol	58.33	72.12
KRG88877	Soybean	cytosol	35.78	63.48
KRH72403	Soybean	cytosol	41.18	62.22
KRG99305	Soybean	cytosol	60.78	61.69
EES05862	Sorghum	plastid	27.94	19.79

Protein Annotations

KEGG:00190+3.6.1.1	Gene3D:3.90.80.10	MapMan:35.1	EntrezGene:8064933	UniProt:C5WM76	EnsemblPlants:EER94266
ProteinID:EER94266	ProteinID:EER94266.1	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824	GO:GO:0004427
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006796
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	InterPro:IPR036649	HAMAP:MF_00209
PFAM:PF00719	ScanProsite:PS00387	PANTHER:PTHR10286	PANTHER:PTHR10286:SF11	MetaCyc:PWY-7805	MetaCyc:PWY-7807
InterPro:Pyrophosphatase	InterPro:Pyrophosphatase_sf	EnsemblPlantsGene:SORBI_3001G252900	SUPFAM:SSF50324	unigene:Sbi.15564	UniParc:UPI0001A83340
RefSeq:XP_002467268.1	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:-:27447719..27449991

Molecular Weight (calculated)

23362.3 Da

IEP (calculated)

6.163

GRAVY (calculated)

-0.337

Length

204 amino acids

Sequence
(BLAST)

001: MAEEKSVPRL NERIMSTLSK RSVAAHSWHD LEIGPGAPAV FNCVVEITKG SKVKYELDKK TGMIKVDRVL YSSVVYPHNY GFIPRTLCED GDPMDVLVLM
101: QEPVIPGCFL RARAIGLMPM IDQGEKDDKI IAVCVDDPEY RHLTDLKELS PHRLNEIRRF FEDYKKNENK EVAVNDFLPP TTSLEAIQHS MDLYAEYILH
201: SLRR

Best Arabidopsis Sequence Match ( AT1G01050.2 )
(BLAST)

001: MSEETKDNQR LQRPAPRLNE RILSSLSRRS VAAHPWHDLE IGPGAPQIFN VVVEITKGSK VKYELDKKTG LIKVDRILYS SVVYPHNYGF VPRTLCEDND
101: PIDVLVIMQE PVLPGCFLRA RAIGLMPMID QGEKDDKIIA VCVDDPEYKH YTDIKELPPH RLSEIRRFFE DYKKNENKEV AVNDFLPSES AVEAIQYSMD
201: LYAEYILHTL RR

Arabidopsis Description

PPA1Soluble inorganic pyrophosphatase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q93V56]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.