CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EER92590
EER94266
EES18298
KXG27493
OQU81040
OQU87920

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G01480.1	EER94266	AT1G01050.1	21798944
AT4G01480.1	EES18298	AT1G01050.1	21798944
AT4G01480.1	KXG27493	AT1G01050.1	21798944
AT4G01480.1	OQU87920	AT1G01050.1	21798944
AT4G01480.1	EER92590	AT2G32840.1	21798944
AT4G01480.1	OQU81040	AT5G65683.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d026680_P003	Maize	cytosol	97.66	97.66
Os04t0687100-01	Rice	cytosol, plasma membrane	96.26	96.71
TraesCS2D01G587100.1	Wheat	cytosol	93.93	95.26
TraesCS2A01G576400.1	Wheat	golgi	93.93	93.06
TraesCS2B01G611000.2	Wheat	cytosol	92.99	91.71
GSMUA_Achr7P03170_001	Banana	cytosol	87.85	88.68
GSMUA_Achr3P22500_001	Banana	cytosol	86.92	87.74
PGSC0003DMT400015012	Potato	cytosol	78.04	87.43
GSMUA_Achr8P07910_001	Banana	cytosol	86.45	87.26
GSMUA_Achr6P19560_001	Banana	cytosol	85.98	86.79
Solyc08g083370.2.1	Tomato	cytosol	81.78	85.37
EER94266	Sorghum	cytosol	81.31	85.29
Bra032616.1-P	Field mustard	cytosol	79.91	84.24
TraesCS3B01G077900.2	Wheat	plastid	93.46	83.68
Solyc12g055830.1.1	Tomato	extracellular	83.18	83.57
Bra033292.1-P	Field mustard	cytosol	82.24	83.02
KRH47754	Soybean	cytosol	82.24	83.02
PGSC0003DMT400012843	Potato	extracellular	81.78	82.94
AT1G01050.1	Thale cress	cytosol	81.78	82.55
EES18298	Sorghum	cytosol	88.32	82.53
Bra008551.1-P	Field mustard	cytosol	82.24	82.24
Zm00001d002889_P002	Maize	cytosol	97.2	82.21
Solyc08g013680.2.1	Tomato	cytosol	42.52	81.98
KRG97263	Soybean	cytosol	80.37	81.52
KRH68981	Soybean	cytosol	80.37	81.52
AT2G46860.1	Thale cress	cytosol	82.24	81.48
Bra037416.1-P	Field mustard	cytosol	81.31	81.31
OQU87920	Sorghum	cytosol	62.62	81.21
Bra040479.1-P	Field mustard	cytosol	81.31	80.56
VIT_02s0025g02980.t01	Wine grape	cytosol	79.91	79.91
PGSC0003DMT400031865	Potato	cytosol	78.5	79.25
KXG30923	Sorghum	cytosol	76.17	79.13
AT4G01480.1	Thale cress	cytosol	78.04	77.31
EES18902	Sorghum	cytosol	76.64	76.64
CDY69447	Canola	cytosol	28.04	75.95
KRG98973	Soybean	cytosol	69.16	75.51
KRH06335	Soybean	cytosol	76.64	73.54
Os01t0322300-00	Rice	cytosol	24.3	70.27
KRG88877	Soybean	cytosol	36.92	68.7
KRH72403	Soybean	cytosol	41.12	65.19
KRG99305	Soybean	cytosol	60.28	64.18
GSMUA_Achr5P26130_001	Banana	plastid	84.58	62.2
EES05862	Sorghum	plastid	27.57	20.49

Protein Annotations

KEGG:00190+3.6.1.1	Gene3D:3.90.80.10	MapMan:35.1	UniProt:A0A1B6PPB3	GO:GO:0000287	GO:GO:0003674
GO:GO:0003824	GO:GO:0004427	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006796	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787
InterPro:IPR036649	EnsemblPlants:KXG27493	ProteinID:KXG27493	ProteinID:KXG27493.1	HAMAP:MF_00209	PFAM:PF00719
ScanProsite:PS00387	PANTHER:PTHR10286	PANTHER:PTHR10286:SF22	MetaCyc:PWY-7805	MetaCyc:PWY-7807	InterPro:Pyrophosphatase
InterPro:Pyrophosphatase_sf	EnsemblPlantsGene:SORBI_3006G276700	SUPFAM:SSF50324	UniParc:UPI0001C80591	:	:

Description

hypothetical protein

Coordinates

chr6:-:60765127..60769426

Molecular Weight (calculated)

24355.2 Da

IEP (calculated)

5.692

GRAVY (calculated)

-0.417

Length

214 amino acids

Sequence
(BLAST)

001: MSEEDKVAAS AEQPKRTPKL NERILSSLSR RSVAAHPWHD LEIGPGAPAV FNVVVEITKG SKVKYELDKK TGLIKVDRVL YSSVVYPHNY GFIPRTLCED
101: NDPMDVLVLM QEPVIPGSFL RARAIGLMPM IDQGEKDDKI IAVCADDPEY RHYNDISELS PHRLQEIKRF FEDYKKNENK EVAVDAFLPA TTARDAIQYS
201: MDLYAQYILQ SLRQ

Best Arabidopsis Sequence Match ( AT2G46860.1 )
(BLAST)

001: MSEEAYEETQ ESSQSPRPVP KLNERILSTL SRRSVAAHPW HDLEIGPEAP LVFNVVVEIT KGSKVKYELD KKTGLIKVDR ILYSSVVYPH NYGFIPRTLC
101: EDNDPLDVLV LMQEPVLPGC FLRARAIGLM PMIDQGEKDD KIIAVCADDP EYKHFTDIKQ LAPHRLQEIR RFFEDYKKNE NKKVAVNDFL PSESAHEAIQ
201: YSMDLYAEYI LHTLRR

Arabidopsis Description

PPA3PPa3 [Source:UniProtKB/TrEMBL;Acc:A0A178VZ15]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.