Factsheet for Os04t0687100-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, cytosol

Predictor Summary:

cytosol 5
plastid 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0322300-00
Os01t0866500-01
Os03t0234600-00
Os04t0101800-01
Os04t0687100-01
Os05t0438500-01
Os10t0406100-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G01480.1	Os01t0322300-00	AT1G01050.1	21798944
AT4G01480.1	Os01t0866500-01	AT1G01050.1	21798944
AT4G01480.1	Os04t0687100-01	AT1G01050.1	21798944
AT4G01480.1	Os05t0438500-01	AT1G01050.1	21798944
AT4G01480.1	Os10t0406100-01	AT1G01050.1	21798944
AT4G01480.1	Os03t0234600-00	AT2G32840.1	21798944
AT4G01480.1	Os04t0101800-01	AT5G65683.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG27493	Sorghum	cytosol	96.71	96.26
TraesCS2D01G587100.1	Wheat	cytosol	95.31	96.21
Zm00001d026680_P003	Maize	cytosol	95.77	95.33
TraesCS2A01G576400.1	Wheat	golgi	95.77	94.44
TraesCS2B01G611000.2	Wheat	cytosol	94.84	93.09
GSMUA_Achr3P22500_001	Banana	cytosol	87.79	88.21
GSMUA_Achr7P03170_001	Banana	cytosol	87.79	88.21
PGSC0003DMT400015012	Potato	cytosol	78.87	87.96
GSMUA_Achr8P07910_001	Banana	cytosol	86.85	87.26
GSMUA_Achr6P19560_001	Banana	cytosol	86.39	86.79
Solyc08g083370.2.1	Tomato	cytosol	83.1	86.34
Os12t0191150-01	Rice	cytosol	11.74	86.21
Os01t0866500-01	Rice	cytosol	84.98	85.38
Os10t0406100-01	Rice	cytosol	81.69	85.29
Os05t0438500-01	Rice	cytosol	89.67	85.27
Bra032616.1-P	Field mustard	cytosol	81.22	85.22
Solyc12g055830.1.1	Tomato	extracellular	84.51	84.51
TraesCS3B01G077900.2	Wheat	plastid	94.37	84.1
PGSC0003DMT400012843	Potato	extracellular	83.1	83.89
KRH47754	Soybean	cytosol	83.1	83.49
Bra033292.1-P	Field mustard	cytosol	83.1	83.49
AT1G01050.1	Thale cress	cytosol	82.63	83.02
Solyc08g013680.2.1	Tomato	cytosol	43.19	82.88
KRG97263	Soybean	cytosol	81.69	82.46
KRH68981	Soybean	cytosol	81.69	82.46
AT2G46860.1	Thale cress	cytosol	83.1	81.94
Bra037416.1-P	Field mustard	cytosol	82.16	81.78
Bra040479.1-P	Field mustard	cytosol	82.63	81.48
Bra008551.1-P	Field mustard	cytosol	81.22	80.84
Zm00001d002889_P002	Maize	cytosol	95.77	80.63
PGSC0003DMT400031865	Potato	cytosol	79.81	80.19
VIT_02s0025g02980.t01	Wine grape	cytosol	79.81	79.44
Os02t0704900-02	Rice	plasma membrane, plastid	78.87	78.5
CDY69447	Canola	cytosol	29.11	78.48
AT4G01480.1	Thale cress	cytosol	77.93	76.85
Os05t0114000-01	Rice	cytosol	77.46	76.39
KRG98973	Soybean	cytosol	69.95	76.02
Os01t0974800-01	Rice	cytosol	75.59	74.19
KRH06335	Soybean	cytosol	77.46	73.99
Os01t0322300-00	Rice	cytosol	24.88	71.62
KRG88877	Soybean	cytosol	37.56	69.57
KRH72403	Soybean	cytosol	42.25	66.67
KRG99305	Soybean	cytosol	60.56	64.18
GSMUA_Achr5P26130_001	Banana	plastid	85.92	62.89
Os11t0612950-00	Rice	cytosol	14.55	38.75
Os02t0768600-01	Rice	plastid	28.17	20.41

Protein Annotations

KEGG:00190+3.6.1.1	Gene3D:3.90.80.10	MapMan:35.1	EntrezGene:4337476	EMBL:AK061239	EMBL:AK073929
ProteinID:BAF16245.1	ProteinID:BAS91745.1	ProteinID:CAD41934.2	ProteinID:EEE61951.1	GO:GO:0000287	GO:GO:0003674
GO:GO:0003824	GO:GO:0004427	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006796	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787
InterPro:IPR036649	HAMAP:MF_00209	EnsemblPlantsGene:Os04g0687100	EnsemblPlants:Os04t0687100-01	PFAM:PF00719	ScanProsite:PS00387
PANTHER:PTHR10286	PANTHER:PTHR10286:SF22	InterPro:Pyrophosphatase	InterPro:Pyrophosphatase_sf	UniProt:Q7XTL6	SUPFAM:SSF50324
UniParc:UPI000021C75A	RefSeq:XP_015633507.1	:	:	:	:

Description

Similar to Soluble inorganic pyrophosphatase (EC 3.6.1.1) (Pyrophosphate phospho- hydrolase) (PPase). (Os04t0687100-01)

Coordinates

chr4:-:35120757..35124119

Molecular Weight (calculated)

24194.9 Da

IEP (calculated)

5.683

GRAVY (calculated)

-0.426

Length

213 amino acids

Sequence
(BLAST)

001: MSEEDTNAAA GQPRRAPKLN ERILSSLSRR SVAAHPWHDL EIGPGAPAVF NVVVEITKGS KVKYELDKKT GLIKVDRVLY SSVVYPHNYG FIPRTLCEDN
101: DPMDVLVLMQ EPVIPGSFLR ARAIGLMPMI DQGEKDDKII AVCADDPEYR HYNDISELSP HRLQEIKRFF EDYKKNENKE VAVDAFLPAN TARDAIQYSM
201: DLYAQYILQS LRQ

Best Arabidopsis Sequence Match ( AT2G46860.1 )
(BLAST)

001: MSEEAYEETQ ESSQSPRPVP KLNERILSTL SRRSVAAHPW HDLEIGPEAP LVFNVVVEIT KGSKVKYELD KKTGLIKVDR ILYSSVVYPH NYGFIPRTLC
101: EDNDPLDVLV LMQEPVLPGC FLRARAIGLM PMIDQGEKDD KIIAVCADDP EYKHFTDIKQ LAPHRLQEIR RFFEDYKKNE NKKVAVNDFL PSESAHEAIQ
201: YSMDLYAEYI LHTLRR

Arabidopsis Description

PPA3PPa3 [Source:UniProtKB/TrEMBL;Acc:A0A178VZ15]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.