Factsheet for VIT_02s0025g02980.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
VIT_02s0025g02980.t01
VIT_07s0205g00030.t01
VIT_13s0156g00270.t01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G01480.1	VIT_02s0025g02980.t01	AT1G01050.1	21798944
AT4G01480.1	VIT_13s0156g00270.t01	AT2G32840.1	21798944
AT4G01480.1	VIT_07s0205g00030.t01	AT5G65683.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY55328	Canola	cytosol	81.78	84.95
CDY32448	Canola	cytosol	81.78	84.95
Bra032616.1-P	Field mustard	cytosol	80.37	84.73
CDY15206	Canola	cytosol	81.78	83.73
KRH47754	Soybean	cytosol	82.71	83.49
Solyc08g083370.2.1	Tomato	cytosol	79.91	83.41
AT1G01050.1	Thale cress	cytosol	82.24	83.02
PGSC0003DMT400015012	Potato	cytosol	73.83	82.72
Bra033292.1-P	Field mustard	cytosol	81.78	82.55
CDX90003	Canola	cytosol	81.78	82.55
EER94266	Sorghum	cytosol	78.5	82.35
GSMUA_Achr3P22500_001	Banana	cytosol	81.31	82.08
PGSC0003DMT400012843	Potato	extracellular	80.84	81.99
VIT_08s0040g02470.t01	Wine grape	cytosol	82.71	81.94
GSMUA_Achr7P03170_001	Banana	cytosol	80.84	81.6
KRG97263	Soybean	cytosol	80.37	81.52
TraesCS1B01G355800.1	Wheat	cytosol	78.04	81.46
Os10t0406100-01	Rice	cytosol	77.57	81.37
CDY01933	Canola	cytosol	81.31	81.31
CDX97250	Canola	cytosol	81.31	81.31
Bra037416.1-P	Field mustard	cytosol	81.31	81.31
Bra008551.1-P	Field mustard	cytosol	81.31	81.31
CDY07141	Canola	cytosol	80.84	80.84
Solyc12g055830.1.1	Tomato	extracellular	80.37	80.75
GSMUA_Achr6P19560_001	Banana	cytosol	79.91	80.66
KRH68981	Soybean	cytosol	79.44	80.57
Zm00001d026680_P003	Maize	cytosol	80.37	80.37
Solyc08g013680.2.1	Tomato	cytosol	41.59	80.18
AT2G46860.1	Thale cress	cytosol	80.84	80.09
KXG27493	Sorghum	cytosol	79.91	79.91
Os04t0687100-01	Rice	cytosol, plasma membrane	79.44	79.81
CDY27516	Canola	cytosol	80.37	79.63
CDY48009	Canola	cytosol	80.37	79.63
Bra040479.1-P	Field mustard	cytosol	80.37	79.63
TraesCS2D01G587100.1	Wheat	cytosol	78.5	79.62
TraesCS1A01G342700.1	Wheat	cytosol	75.23	78.54
GSMUA_Achr8P07910_001	Banana	cytosol	77.57	78.3
VIT_04s0023g02050.t01	Wine grape	cytosol	78.5	78.14
TraesCS1D01G344800.2	Wheat	cytosol	74.77	78.05
TraesCS2A01G576400.1	Wheat	golgi	78.5	77.78
TraesCS2B01G611000.2	Wheat	cytosol	78.04	76.96
PGSC0003DMT400031865	Potato	cytosol	76.17	76.89
AT4G01480.1	Thale cress	cytosol	77.1	76.39
TraesCS1B01G283300.1	Wheat	cytosol	76.64	75.93
TraesCS1D01G273500.1	Wheat	cytosol	76.64	75.93
TraesCS1A01G273500.1	Wheat	cytosol	76.17	75.46
Zm00001d010171_P002	Maize	cytosol, extracellular	78.97	75.45
Os05t0438500-01	Rice	cytosol	78.04	74.55
EES18298	Sorghum	cytosol	79.44	74.24
Os01t0866500-01	Rice	cytosol	73.36	74.06
KRH06335	Soybean	cytosol	76.17	73.09
KRG98973	Soybean	cytosol	66.82	72.96
HORVU1Hr1G075660.1	Barley	cytosol	77.1	72.69
OQU87920	Sorghum	cytosol	54.67	70.91
TraesCS3B01G077900.2	Wheat	plastid	78.5	70.29
Zm00001d002889_P002	Maize	cytosol	79.44	67.19
HORVU1Hr1G075110.1	Barley	plastid	71.96	66.38
KRG88877	Soybean	cytosol	35.05	65.22
KRH72403	Soybean	cytosol	41.12	65.19
KRG99305	Soybean	cytosol	59.81	63.68
GSMUA_Achr5P26130_001	Banana	plastid	79.91	58.76
Os01t0322300-00	Rice	cytosol	20.09	58.11
HORVU6Hr1G058900.2	Barley	cytosol	35.05	41.67
HORVU2Hr1G065020.1	Barley	cytosol	22.9	35.51
VIT_18s0001g08170.t01	Wine grape	cytosol	23.83	16.78
VIT_03s0088g01290.t01	Wine grape	plastid	9.35	13.33

Protein Annotations

KEGG:00190+3.6.1.1	EntrezGene:100256417	wikigene:100256417	Gene3D:3.90.80.10	MapMan:35.1	ProteinID:CBI34623
ProteinID:CBI34623.3	UniProt:D7TVU8	EMBL:FN596251	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824
GO:GO:0004427	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006796	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	InterPro:IPR036649
EntrezGene:LOC100256417	wikigene:LOC100256417	HAMAP:MF_00209	PFAM:PF00719	ScanProsite:PS00387	PANTHER:PTHR10286
PANTHER:PTHR10286:SF10	InterPro:Pyrophosphatase	InterPro:Pyrophosphatase_sf	SUPFAM:SSF50324	UniParc:UPI00015CC719	ArrayExpress:VIT_02s0025g02980
EnsemblPlantsGene:VIT_02s0025g02980	EnsemblPlants:VIT_02s0025g02980.t01	unigene:Vvi.20777	RefSeq:XP_002271762	RefSeq:XP_002271762.1	:

Description

No Description!

Coordinates

chr2:+:2536049..2537439

Molecular Weight (calculated)

24385.1 Da

IEP (calculated)

6.161

GRAVY (calculated)

-0.449

Length

214 amino acids

Sequence
(BLAST)

001: MGDGQKKTEL YDASQRPSSL NERILSSMSR RSVAAHPWHD LEIGPGAPQI VNCVVEITKG SKVKYELDKK TGLIKVDRVL YSSVVYPHNY GFIPRTLCED
101: NDPLDVLILM QEPVVPGCFL RARAIGLMPM IDQGENDDKI IAVCADDPEY RHYTDIKELP PHRLAEIRRF FEDYKKNENK EVAVNDFLPS SSAHQAVQHS
201: IDLYAEYILQ SLRR

Best Arabidopsis Sequence Match ( AT1G01050.2 )
(BLAST)

001: MSEETKDNQR LQRPAPRLNE RILSSLSRRS VAAHPWHDLE IGPGAPQIFN VVVEITKGSK VKYELDKKTG LIKVDRILYS SVVYPHNYGF VPRTLCEDND
101: PIDVLVIMQE PVLPGCFLRA RAIGLMPMID QGEKDDKIIA VCVDDPEYKH YTDIKELPPH RLSEIRRFFE DYKKNENKEV AVNDFLPSES AVEAIQYSMD
201: LYAEYILHTL RR

Arabidopsis Description

PPA1Soluble inorganic pyrophosphatase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q93V56]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.