Factsheet for Solyc08g013680.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
plastid 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	secretory
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol, mitochondrion
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc01g073920.2.1
Solyc02g091710.2.1
Solyc08g013680.2.1
Solyc08g083370.2.1
Solyc12g055830.1.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G01480.1	Solyc08g013680.2.1	AT1G01050.1	21798944
AT4G01480.1	Solyc08g083370.2.1	AT1G01050.1	21798944
AT4G01480.1	Solyc12g055830.1.1	AT1G01050.1	21798944
AT4G01480.1	Solyc01g073920.2.1	AT2G32840.1	21798944
AT4G01480.1	Solyc02g091710.2.1	AT5G65683.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os01t0322300-00	Rice	cytosol	37.84	56.76
PGSC0003DMT400015012	Potato	cytosol	87.39	50.79
Solyc08g083370.2.1	Tomato	cytosol	90.99	49.27
Solyc12g055830.1.1	Tomato	extracellular	90.99	47.42
Bra032616.1-P	Field mustard	cytosol	84.68	46.31
CDY32448	Canola	cytosol	84.68	45.63
CDY55328	Canola	cytosol	83.78	45.15
EER94266	Sorghum	cytosol	82.88	45.1
CDY15206	Canola	cytosol	84.68	44.98
AT4G01480.1	Thale cress	cytosol	87.39	44.91
GSMUA_Achr6P19560_001	Banana	cytosol	85.59	44.81
KRH47754	Soybean	cytosol	85.59	44.81
AT1G01050.1	Thale cress	cytosol	84.68	44.34
GSMUA_Achr7P03170_001	Banana	cytosol	84.68	44.34
Os10t0406100-01	Rice	cytosol	81.08	44.12
CDX97250	Canola	cytosol	84.68	43.93
CDY01933	Canola	cytosol	84.68	43.93
CDY07141	Canola	cytosol	84.68	43.93
Bra037416.1-P	Field mustard	cytosol	84.68	43.93
Bra008551.1-P	Field mustard	cytosol	84.68	43.93
CDX90003	Canola	cytosol	83.78	43.87
Bra033292.1-P	Field mustard	cytosol	83.78	43.87
GSMUA_Achr3P22500_001	Banana	cytosol	83.78	43.87
TraesCS2D01G587100.1	Wheat	cytosol	82.88	43.6
AT2G46860.1	Thale cress	cytosol	84.68	43.52
GSMUA_Achr8P07910_001	Banana	cytosol	82.88	43.4
Os04t0687100-01	Rice	cytosol, plasma membrane	82.88	43.19
CDY48009	Canola	cytosol	83.78	43.06
CDY27516	Canola	cytosol	83.78	43.06
Bra040479.1-P	Field mustard	cytosol	83.78	43.06
Zm00001d026680_P003	Maize	cytosol	82.88	42.99
TraesCS2A01G576400.1	Wheat	golgi	82.88	42.59
KXG27493	Sorghum	cytosol	81.98	42.52
TraesCS1A01G342700.1	Wheat	cytosol	78.38	42.44
TraesCS1B01G355800.1	Wheat	cytosol	78.38	42.44
KRH68981	Soybean	cytosol	80.18	42.18
KRG97263	Soybean	cytosol	80.18	42.18
TraesCS1D01G344800.2	Wheat	cytosol	77.48	41.95
OQU87920	Sorghum	cytosol	62.16	41.82
VIT_02s0025g02980.t01	Wine grape	cytosol	80.18	41.59
TraesCS2B01G611000.2	Wheat	cytosol	81.08	41.47
Solyc09g010380.2.1	Tomato	cytosol	79.28	40.74
Zm00001d010171_P002	Maize	cytosol, extracellular	81.98	40.62
Os05t0438500-01	Rice	cytosol	81.98	40.62
Os01t0866500-01	Rice	cytosol	77.48	40.57
TraesCS1A01G273500.1	Wheat	cytosol	78.38	40.28
TraesCS1D01G273500.1	Wheat	cytosol	77.48	39.81
EES18298	Sorghum	cytosol	81.98	39.74
HORVU1Hr1G075660.1	Barley	cytosol	81.08	39.65
TraesCS1B01G283300.1	Wheat	cytosol	76.58	39.35
TraesCS3B01G077900.2	Wheat	plastid	82.88	38.49
KRH06335	Soybean	cytosol	73.87	36.77
Zm00001d002889_P002	Maize	cytosol	82.88	36.36
KRG98973	Soybean	cytosol	63.96	36.22
Solyc02g085050.2.1	Tomato	cytosol	81.08	33.58
HORVU1Hr1G075110.1	Barley	plastid	68.47	32.76
GSMUA_Achr5P26130_001	Banana	plastid	85.59	32.65
KRG99305	Soybean	cytosol	51.35	28.36
HORVU6Hr1G058900.2	Barley	cytosol	24.32	15.0
Solyc10g047950.1.1	Tomato	plastid	27.93	10.54
Solyc01g106430.2.1	Tomato	plastid	27.03	10.34
KRG88877	Soybean	cytosol	2.7	2.61
KRH72403	Soybean	cytosol	2.7	2.22
HORVU2Hr1G065020.1	Barley	cytosol	1.8	1.45

Protein Annotations

KEGG:00190+3.6.1.1	Gene3D:3.90.80.10	MapMan:35.1	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824
GO:GO:0004427	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006796	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	InterPro:IPR036649
UniProt:K4CJ03	PFAM:PF00719	PANTHER:PTHR10286	PANTHER:PTHR10286:SF37	InterPro:Pyrophosphatase	InterPro:Pyrophosphatase_sf
SUPFAM:SSF50324	EnsemblPlantsGene:Solyc08g013680.2	EnsemblPlants:Solyc08g013680.2.1	UniParc:UPI000276AE91	SEG:seg	:

Description

No Description!

Coordinates

chr8:+:3150214..3151010

Molecular Weight (calculated)

12971.7 Da

IEP (calculated)

4.753

GRAVY (calculated)

-0.382

Length

111 amino acids

Sequence
(BLAST)

001: MDVLVLMQEP VLPGCFLRAR AIGLMPMIDQ GEKDDKIIAV CADDPEYRHY TNINQLPPHR LAEIRRFFEE YKKNENKEVA VDEFLQPNTA AEAIQYSMDL
101: YAEYILHTLR K

Best Arabidopsis Sequence Match ( AT4G01480.1 )
(BLAST)

001: MNGEEVKTSQ PQKKLQNPTP RLNERILSSL SKRSVAAHPW HDLEIGPGAP VIFNVVIEIS KGSKVKYELD KKTGLIKVDR ILYSSVVYPH NYGFVPRTLC
101: EDNDPIDVLV IMQEPVLPGC FLRARAIGLM PMIDQGEKDD KIIAVCVDDP EYKHITNINE LPPHRLSEIR RFFEDYKKNE NKEVAVNDFL QPGPAIEAIQ
201: YSMDLYAEYI LHTLRR

Arabidopsis Description

PPA5PPa5 [Source:UniProtKB/TrEMBL;Acc:A0A178V127]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.