Factsheet for Os10t0406100-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0322300-00
Os01t0866500-01
Os03t0234600-00
Os04t0101800-01
Os04t0687100-01
Os05t0438500-01
Os10t0406100-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G01480.1	Os01t0322300-00	AT1G01050.1	21798944
AT4G01480.1	Os01t0866500-01	AT1G01050.1	21798944
AT4G01480.1	Os04t0687100-01	AT1G01050.1	21798944
AT4G01480.1	Os05t0438500-01	AT1G01050.1	21798944
AT4G01480.1	Os10t0406100-01	AT1G01050.1	21798944
AT4G01480.1	Os03t0234600-00	AT2G32840.1	21798944
AT4G01480.1	Os04t0101800-01	AT5G65683.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER94266	Sorghum	cytosol	91.18	91.18
TraesCS1B01G355800.1	Wheat	cytosol	88.24	87.8
TraesCS1A01G342700.1	Wheat	cytosol	87.75	87.32
TraesCS1D01G344800.2	Wheat	cytosol	87.25	86.83
Bra032616.1-P	Field mustard	cytosol	83.82	84.24
PGSC0003DMT400015012	Potato	cytosol	77.94	83.25
AT1G01050.1	Thale cress	cytosol	85.29	82.08
Solyc08g083370.2.1	Tomato	cytosol	82.35	81.95
Bra008551.1-P	Field mustard	cytosol	85.78	81.78
Os04t0687100-01	Rice	cytosol, plasma membrane	85.29	81.69
Bra033292.1-P	Field mustard	cytosol	84.8	81.6
KRH47754	Soybean	cytosol	84.8	81.6
HORVU1Hr1G075660.1	Barley	cytosol	90.69	81.5
Solyc08g013680.2.1	Tomato	cytosol	44.12	81.08
KRH68981	Soybean	cytosol	83.33	80.57
Bra037416.1-P	Field mustard	cytosol	84.31	80.37
PGSC0003DMT400012843	Potato	extracellular	82.84	80.09
Solyc12g055830.1.1	Tomato	extracellular	83.33	79.81
AT2G46860.1	Thale cress	cytosol	84.31	79.63
KRG97263	Soybean	cytosol	82.35	79.62
Bra040479.1-P	Field mustard	cytosol	83.82	79.17
AT4G01480.1	Thale cress	cytosol	83.33	78.7
Os01t0866500-01	Rice	cytosol	81.37	78.3
Os05t0438500-01	Rice	cytosol	85.78	78.12
VIT_02s0025g02980.t01	Wine grape	cytosol	81.37	77.57
Os05t0114000-01	Rice	cytosol	81.86	77.31
Os02t0704900-02	Rice	plasma membrane, plastid	80.88	77.1
PGSC0003DMT400031865	Potato	cytosol	79.41	76.42
Os01t0974800-01	Rice	cytosol	79.9	75.12
KRG98973	Soybean	cytosol	70.59	73.47
KRH06335	Soybean	cytosol	79.9	73.09
Os12t0191150-01	Rice	cytosol	10.29	72.41
KRG88877	Soybean	cytosol	36.27	64.35
KRH72403	Soybean	cytosol	41.18	62.22
KRG99305	Soybean	cytosol	60.78	61.69
Os01t0322300-00	Rice	cytosol	21.08	58.11
Os11t0612950-00	Rice	cytosol	14.71	37.5
Os02t0768600-01	Rice	plastid	28.92	20.07

Protein Annotations

KEGG:00190+3.6.1.1	Gene3D:3.90.80.10	MapMan:35.1	ProteinID:ABB47572.1	EMBL:AK072672	ProteinID:BAF26475.1
ProteinID:BAT10773.1	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824	GO:GO:0004427	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006796	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	InterPro:IPR036649
EMBL:JF969230	HAMAP:MF_00209	EnsemblPlantsGene:Os10g0406100	EnsemblPlants:Os10t0406100-01	PFAM:PF00719	ScanProsite:PS00387
PANTHER:PTHR10286	PANTHER:PTHR10286:SF11	InterPro:Pyrophosphatase	InterPro:Pyrophosphatase_sf	UniProt:Q338G1	SUPFAM:SSF50324
UniParc:UPI00005E1E5D	:	:	:	:	:

Description

Similar to PRLI-interacting factor F (Fragment). (Os10t0406100-01)

Coordinates

chr10:-:13867136..13869231

Molecular Weight (calculated)

23344.2 Da

IEP (calculated)

6.250

GRAVY (calculated)

-0.344

Length

204 amino acids

Sequence
(BLAST)

001: MAEEKKTPCL NERILSSLSK RSVAAHSWHD LEIGPGAPQV FNVVVEITKG SKVKYELDKK TGMIKVDRVL YSSVVYPHNY GFIPRTLCED GDPMDVLVLM
101: QEPVIPGCYL RAKAIGLMPM IDQGEKDDKI IAVCVDDPEF RHFNDLKELS PHRLAEIRRF FEDYKKNENK EVAVNDFLPP ATAQEAIKYS MDLYAEYILH
201: SLRR

Best Arabidopsis Sequence Match ( AT1G01050.2 )
(BLAST)

001: MSEETKDNQR LQRPAPRLNE RILSSLSRRS VAAHPWHDLE IGPGAPQIFN VVVEITKGSK VKYELDKKTG LIKVDRILYS SVVYPHNYGF VPRTLCEDND
101: PIDVLVIMQE PVLPGCFLRA RAIGLMPMID QGEKDDKIIA VCVDDPEYKH YTDIKELPPH RLSEIRRFFE DYKKNENKEV AVNDFLPSES AVEAIQYSMD
201: LYAEYILHTL RR

Arabidopsis Description

PPA1Soluble inorganic pyrophosphatase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q93V56]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.