Factsheet for Os03t0234600-00

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 6
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0350900-02
Os01t0621300-01
Os02t0126700-01
Os02t0258300-01
Os02t0704600-01
Os02t0708400-01
Os02t0758000-01
Os03t0339700-01
Os05t0154600-01
Os05t0476100-01
Os05t0586400-01
Os06t0102700-01
Os06t0219500-00
Os06t0524300-01
Os07t0677900-01
Os08t0108500-01
Os08t0151400-01
Os10t0512800-01
Os12t0538300-01
Os12t0552400-01
Os12t0552500-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G32840.1	Os01t0350900-02	AT2G47700.1	21798944
AT2G32840.1	Os05t0154600-01	AT2G47700.1	21798944
AT2G32840.1	Os12t0552400-01	AT2G47710.1	21798944
AT2G32840.1	Os12t0552500-01	AT2G47710.1	21798944
AT2G32840.1	Os02t0708400-01	AT3G27960.1	21798944
AT2G32840.1	Os02t0704600-01	AT3G50910.1	21798944
AT2G32840.1	Os06t0102700-01	AT3G54850.1	21798944
AT2G32840.1	Os03t0339700-01	AT3G56270.1	21798944
AT2G32840.1	Os05t0476100-01	AT3G56270.1	21798944
AT2G32840.1	Os07t0677900-01	AT3G56270.1	21798944
AT2G32840.1	Os08t0108500-01	AT4G00120.1	21798944
AT2G32840.1	Os01t0621300-01	AT4G01090.1	21798944
AT2G32840.1	Os02t0258300-01	AT4G01090.1	21798944
AT2G32840.1	Os05t0586400-01	AT4G01090.1	21798944
AT2G32840.1	Os06t0524300-01	AT4G01090.1	21798944
AT2G32840.1	Os02t0758000-01	AT4G25200.1	21798944
AT2G32840.1	Os06t0219500-00	AT4G25200.1	21798944
AT2G32840.1	Os02t0126700-01	AT4G30330.1	21798944
AT2G32840.1	Os08t0151400-01	AT4G30330.1	21798944
AT2G32840.1	Os10t0512800-01	AT4G39050.1	21798944
AT2G32840.1	Os12t0538300-01	AT5G11980.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER92590	Sorghum	plastid	61.13	52.43
TraesCS4D01G234100.1	Wheat	plastid	64.91	45.62
TraesCS4A01G076800.1	Wheat	plastid	64.15	45.21
TraesCS4B01G232900.1	Wheat	plastid	63.4	44.33
Zm00001d047985_P002	Maize	plastid	60.38	43.84
HORVU4Hr1G064990.1	Barley	plastid	63.4	42.97
GSMUA_Achr7P11350_001	Banana	endoplasmic reticulum, extracellular	16.6	25.43
KRH43426	Soybean	cytosol	22.64	22.14
KRH13875	Soybean	cytosol, nucleus, plastid	23.02	21.18
Bra005553.1-P	Field mustard	nucleus, plastid	20.75	18.39
CDY12159	Canola	nucleus, plastid	20.38	18.18
Solyc01g073920.2.1	Tomato	cytosol, plastid	21.89	16.96
CDY52552	Canola	nucleus, plastid	17.74	15.99
VIT_13s0156g00270.t01	Wine grape	cytosol	6.79	14.17
Bra015366.1-P	Field mustard	nucleus, plastid	17.36	13.61
CDX89775	Canola	plastid	16.98	13.31
AT1G04930.2	Thale cress	nucleus, plastid	18.11	13.26
CDY18271	Canola	plastid	14.72	13.13
GSMUA_Achr6P06320_001	Banana	nucleus	5.28	13.08
AT2G32840.1	Thale cress	nucleus, plastid	16.6	13.06
PGSC0003DMT400016192	Potato	nucleus, plastid	13.21	12.24

Protein Annotations

EnsemblPlants:Os03t0234600-00	EnsemblPlantsGene:Os03g0234600	GO:GO:0005575	GO:GO:0007049	GO:GO:0008150	GO:GO:0009987
GO:GO:0017053	PANTHER:PTHR37173	ProteinID:BAS83138.1	SEG:seg	UniParc:UPI0003938ADA	UniProt:A0A0P0VV48
MapMan:35.2	:	:	:	:	:

Description

Hypothetical conserved gene. (Os03t0234600-00)

Coordinates

chr3:-:7111305..7115133

Molecular Weight (calculated)

27351.1 Da

IEP (calculated)

10.380

GRAVY (calculated)

-0.443

Length

265 amino acids

Sequence
(BLAST)

001: MSSPPPQRPP ATSPPAPAAA AASPQPLPRA FLAAAASSPR RAAASPAPAP PPPPFTGRPL NPNPSHHATA AHGILYPVAT SSAAAAAAAA TANHRRAPAV
101: AVGYPRAHAV AVPIVQPQHP LAPTHGRSFP AAPRAVVAGV SSRPEQPPRG VPIAQQAQPK VIPLPAVTPS PQEINNSKDS ERSKEDSTTV VINDRKVNLM
201: DSESGSLYAL CRSWVRNGVP HESQPSFGTG APILPRPLPA SVVDSRISEK DNDAEKENSE EEKVS

Best Arabidopsis Sequence Match ( AT2G32840.1 )
(BLAST)

001: MSTPDPNPNP NPNPSVSVAV STPIVTASES PVTQPNTVIT PSSQPQPQTP ASSYRAIAPL HRHHPHQNIY TNPLPIRRSN SVTNSPHQPP HPDPSSLIYP
101: FGSSGRGFPT RPVRQNSNSV ADPVGSPSPG GYTPRGPVYG YHHGQFVSNL DPMNQFMRAA HPQNQQSPQL GSGHMKGVPH FLQPRATPSP TSILDNSGHK
201: KARSRDDALV LVRKRKVRIT EGASLYSLCR SWLRNGAHEG IKPQRIDMMT CLPKPLPVDK TETSLPKDLV EEAICEEDKE DEESVKHLSE SDLLKRHIDR
301: AKKVRARLRE ERLKRIARYK ARLALLLPPF GEQCRNE

Arabidopsis Description

Proline-rich family protein [Source:UniProtKB/TrEMBL;Acc:Q8GYK6]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.