Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 4
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra005553.1-P | Field mustard | nucleus, plastid | 50.15 | 56.52 |
| CDY12159 | Canola | nucleus, plastid | 48.66 | 55.22 |
| CDY52552 | Canola | nucleus, plastid | 45.7 | 52.38 |
| VIT_13s0156g00270.t01 | Wine grape | cytosol | 19.29 | 51.18 |
| GSMUA_Achr7P11350_001 | Banana | endoplasmic reticulum, extracellular | 21.96 | 42.77 |
| AT1G04930.2 | Thale cress | nucleus, plastid | 41.54 | 38.67 |
| GSMUA_Achr6P06320_001 | Banana | nucleus | 12.17 | 38.32 |
| KRH43426 | Soybean | cytosol | 27.6 | 34.32 |
| KRH13875 | Soybean | cytosol, nucleus, plastid | 27.6 | 32.29 |
| Solyc01g073920.2.1 | Tomato | cytosol, plastid | 29.97 | 29.53 |
| TraesCS4B01G232900.1 | Wheat | plastid | 23.15 | 20.58 |
| TraesCS4A01G076800.1 | Wheat | plastid | 22.85 | 20.48 |
| EER92590 | Sorghum | plastid | 18.69 | 20.39 |
| TraesCS4D01G234100.1 | Wheat | plastid | 22.55 | 20.16 |
| HORVU4Hr1G064990.1 | Barley | plastid | 23.15 | 19.95 |
| PGSC0003DMT400016192 | Potato | nucleus, plastid | 16.62 | 19.58 |
| Zm00001d047985_P002 | Maize | plastid | 18.69 | 17.26 |
| Os03t0234600-00 | Rice | plastid | 13.06 | 16.6 |
Protein Annotations
| MapMan:35.2 | EntrezGene:817845 | UniProt:A0A178VY90 | ProteinID:AEC08749.1 | EMBL:AK117550 | ArrayExpress:AT2G32840 |
| EnsemblPlantsGene:AT2G32840 | RefSeq:AT2G32840 | TAIR:AT2G32840 | RefSeq:AT2G32840-TAIR-G | EnsemblPlants:AT2G32840.1 | TAIR:AT2G32840.1 |
| Unigene:At.46123 | EMBL:BT005099 | ncoils:Coil | GO:GO:0005575 | GO:GO:0007049 | GO:GO:0008150 |
| GO:GO:0009987 | GO:GO:0017053 | InterPro:LIN37 | RefSeq:NP_180843.2 | ProteinID:OAP10908.1 | PFAM:PF15306 |
| PO:PO:0000293 | PANTHER:PTHR31336 | UniProt:Q8GYK6 | UniParc:UPI000000C54C | SEG:seg | : |
Description
Proline-rich family protein [Source:UniProtKB/TrEMBL;Acc:Q8GYK6]
Coordinates
chr2:-:13932839..13934949
Molecular Weight (calculated)
37385.3 Da
IEP (calculated)
10.314
GRAVY (calculated)
-0.817
Length
337 amino acids
Sequence
(BLAST)
(BLAST)
001: MSTPDPNPNP NPNPSVSVAV STPIVTASES PVTQPNTVIT PSSQPQPQTP ASSYRAIAPL HRHHPHQNIY TNPLPIRRSN SVTNSPHQPP HPDPSSLIYP
101: FGSSGRGFPT RPVRQNSNSV ADPVGSPSPG GYTPRGPVYG YHHGQFVSNL DPMNQFMRAA HPQNQQSPQL GSGHMKGVPH FLQPRATPSP TSILDNSGHK
201: KARSRDDALV LVRKRKVRIT EGASLYSLCR SWLRNGAHEG IKPQRIDMMT CLPKPLPVDK TETSLPKDLV EEAICEEDKE DEESVKHLSE SDLLKRHIDR
301: AKKVRARLRE ERLKRIARYK ARLALLLPPF GEQCRNE
101: FGSSGRGFPT RPVRQNSNSV ADPVGSPSPG GYTPRGPVYG YHHGQFVSNL DPMNQFMRAA HPQNQQSPQL GSGHMKGVPH FLQPRATPSP TSILDNSGHK
201: KARSRDDALV LVRKRKVRIT EGASLYSLCR SWLRNGAHEG IKPQRIDMMT CLPKPLPVDK TETSLPKDLV EEAICEEDKE DEESVKHLSE SDLLKRHIDR
301: AKKVRARLRE ERLKRIARYK ARLALLLPPF GEQCRNE
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.