Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- cytosol 1
- nucleus 1
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
EER92590 | Sorghum | plastid | 75.34 | 89.0 |
Os03t0234600-00 | Rice | plastid | 43.84 | 60.38 |
TraesCS4B01G232900.1 | Wheat | plastid | 50.14 | 48.28 |
TraesCS4D01G234100.1 | Wheat | plastid | 49.86 | 48.28 |
TraesCS4A01G076800.1 | Wheat | plastid | 49.04 | 47.61 |
HORVU4Hr1G064990.1 | Barley | plastid | 47.67 | 44.5 |
GSMUA_Achr7P11350_001 | Banana | endoplasmic reticulum, extracellular | 20.27 | 42.77 |
GSMUA_Achr6P06320_001 | Banana | nucleus | 11.51 | 39.25 |
VIT_13s0156g00270.t01 | Wine grape | cytosol | 11.51 | 33.07 |
KRH43426 | Soybean | cytosol | 20.0 | 26.94 |
KRH13875 | Soybean | cytosol, nucleus, plastid | 20.55 | 26.04 |
CDY12159 | Canola | nucleus, plastid | 19.73 | 24.24 |
Bra005553.1-P | Field mustard | nucleus, plastid | 19.73 | 24.08 |
Solyc01g073920.2.1 | Tomato | cytosol, plastid | 21.37 | 22.81 |
CDY52552 | Canola | nucleus, plastid | 18.36 | 22.79 |
CDX89775 | Canola | plastid | 18.36 | 19.82 |
Bra015366.1-P | Field mustard | nucleus, plastid | 18.36 | 19.82 |
CDY18271 | Canola | plastid | 15.34 | 18.86 |
AT2G32840.1 | Thale cress | nucleus, plastid | 17.26 | 18.69 |
AT1G04930.2 | Thale cress | nucleus, plastid | 18.36 | 18.51 |
PGSC0003DMT400016192 | Potato | nucleus, plastid | 11.78 | 15.04 |
Protein Annotations
EnsemblPlants:Zm00001d047985_P002 | EnsemblPlants:Zm00001d047985_T002 | EnsemblPlantsGene:Zm00001d047985 | EntrezGene:100276882 | ProteinID:AQL08224.1 | SEG:seg |
UniParc:UPI0008424244 | UniProt:A0A1D6PFC5 | MapMan:35.2 | : | : | : |
Description
proline-rich family protein
Coordinates
chr9:+:147193478..147201096
Molecular Weight (calculated)
39313.8 Da
IEP (calculated)
10.325
GRAVY (calculated)
-0.428
Length
365 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSPPRGQPA TAAVPAVAAA TSPQLPAASH TLPRAFLATS SPRAIVAAPA PPLFTGRPLN PNPPAHGSSV PHGILYPVLK SASTSNSAAA AVTAQLRRVP
101: PMAVGYPRTH AVAIPIAQQQ QPLVHAQPRS FAAVPRALVT GVSTGSEQPP RGVPIGSQPK VNPVPPVGPS NEQSNPKDRE KSREEPTVVV INDRKVNLLD
201: SESGSFYALC RSWVRNGVPH ESQPSFGNGE PLLPRPLPAS VVDSRISDKD DNDVAGEDSD EEPQKKYFPS SMFYIGYSCL HLHLLKSLLV RSKKQCIEGQ
301: TWCSGESYLT ESNLSVFAGK NANGEYNTSD LLKQHVKRAK RIRAGLQKDR LRRIERYKQR LALLL
101: PMAVGYPRTH AVAIPIAQQQ QPLVHAQPRS FAAVPRALVT GVSTGSEQPP RGVPIGSQPK VNPVPPVGPS NEQSNPKDRE KSREEPTVVV INDRKVNLLD
201: SESGSFYALC RSWVRNGVPH ESQPSFGNGE PLLPRPLPAS VVDSRISDKD DNDVAGEDSD EEPQKKYFPS SMFYIGYSCL HLHLLKSLLV RSKKQCIEGQ
301: TWCSGESYLT ESNLSVFAGK NANGEYNTSD LLKQHVKRAK RIRAGLQKDR LRRIERYKQR LALLL
001: MSTPDPNPNP NPNPSVSVAV STPIVTASES PVTQPNTVIT PSSQPQPQTP ASSYRAIAPL HRHHPHQNIY TNPLPIRRSN SVTNSPHQPP HPDPSSLIYP
101: FGSSGRGFPT RPVRQNSNSV ADPVGSPSPG GYTPRGPVYG YHHGQFVSNL DPMNQFMRAA HPQNQQSPQL GSGHMKGVPH FLQPRATPSP TSILDNSGHK
201: KARSRDDALV LVRKRKVRIT EGASLYSLCR SWLRNGAHEG IKPQRIDMMT CLPKPLPVDK TETSLPKDLV EEAICEEDKE DEESVKHLSE SDLLKRHIDR
301: AKKVRARLRE ERLKRIARYK ARLALLLPPF GEQCRNE
101: FGSSGRGFPT RPVRQNSNSV ADPVGSPSPG GYTPRGPVYG YHHGQFVSNL DPMNQFMRAA HPQNQQSPQL GSGHMKGVPH FLQPRATPSP TSILDNSGHK
201: KARSRDDALV LVRKRKVRIT EGASLYSLCR SWLRNGAHEG IKPQRIDMMT CLPKPLPVDK TETSLPKDLV EEAICEEDKE DEESVKHLSE SDLLKRHIDR
301: AKKVRARLRE ERLKRIARYK ARLALLLPPF GEQCRNE
Arabidopsis Description
Proline-rich family protein [Source:UniProtKB/TrEMBL;Acc:Q8GYK6]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.