Factsheet for Zm00001d010610_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 3
nucleus 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
iPSORT:	mitochondrion
MultiLoc:	nucleus
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d005003_P002
Zm00001d008278_P001
Zm00001d010649_P001
Zm00001d013780_P001
Zm00001d014150_P005
Zm00001d018033_P001
Zm00001d028948_P001
Zm00001d033099_P001
Zm00001d033980_P001
Zm00001d037234_P005
Zm00001d038543_P004
Zm00001d038545_P001
Zm00001d041430_P001
Zm00001d043144_P001
Zm00001d047597_P001
Zm00001d052263_P001
Zm00001d052415_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G56270.1	Zm00001d013780_P001	AT2G04630.1	21798944
AT3G56270.1	Zm00001d033099_P001	AT2G04630.1	21798944
AT3G56270.1	Zm00001d005003_P002	AT2G41090.1	17360592
AT3G56270.1	Zm00001d008278_P001	AT2G41090.1	17360592
AT3G56270.1	Zm00001d010649_P001	AT2G41090.1	17360592
AT3G56270.1	Zm00001d028948_P001	AT2G41090.1	17360592
AT3G56270.1	Zm00001d038543_P004	AT2G41090.1	17360592
AT3G56270.1	Zm00001d038545_P001	AT2G41090.1	17360592
AT3G56270.1	Zm00001d041430_P001	AT2G41090.1	17360592
AT3G56270.1	Zm00001d043144_P001	AT2G41090.1	17360592
AT3G56270.1	Zm00001d047597_P001	AT2G41090.1	17360592
AT3G56270.1	Zm00001d052415_P001	AT2G41090.1	17360592
AT3G56270.1	Zm00001d005003_P002	AT2G41100.1	17360592
AT3G56270.1	Zm00001d008278_P001	AT2G41100.1	17360592
AT3G56270.1	Zm00001d010649_P001	AT2G41100.1	17360592
AT3G56270.1	Zm00001d028948_P001	AT2G41100.1	17360592
AT3G56270.1	Zm00001d038543_P004	AT2G41100.1	17360592
AT3G56270.1	Zm00001d038545_P001	AT2G41100.1	17360592
AT3G56270.1	Zm00001d041430_P001	AT2G41100.1	17360592
AT3G56270.1	Zm00001d043144_P001	AT2G41100.1	17360592
AT3G56270.1	Zm00001d047597_P001	AT2G41100.1	17360592
AT3G56270.1	Zm00001d052415_P001	AT2G41100.1	17360592
AT3G56270.1	Zm00001d014150_P005	AT3G01180.1	21798944
AT3G56270.1	Zm00001d018033_P001	AT3G01180.1	21798944
AT3G56270.1	Zm00001d037234_P005	AT3G01180.1	21798944
AT3G56270.1	Zm00001d052263_P001	AT3G01180.1	21798944
AT3G56270.1	Zm00001d033980_P001	AT4G14640.1	17360592
AT3G56270.1	Zm00001d005003_P002	AT5G21274.1	17360592
AT3G56270.1	Zm00001d008278_P001	AT5G21274.1	17360592
AT3G56270.1	Zm00001d010649_P001	AT5G21274.1	17360592
AT3G56270.1	Zm00001d028948_P001	AT5G21274.1	17360592
AT3G56270.1	Zm00001d038543_P004	AT5G21274.1	17360592
AT3G56270.1	Zm00001d038545_P001	AT5G21274.1	17360592
AT3G56270.1	Zm00001d041430_P001	AT5G21274.1	17360592
AT3G56270.1	Zm00001d043144_P001	AT5G21274.1	17360592
AT3G56270.1	Zm00001d047597_P001	AT5G21274.1	17360592
AT3G56270.1	Zm00001d052415_P001	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os05t0476100-01	Rice	cytosol, nucleus, plastid	66.25	65.19
TraesCS1A01G299400.1	Wheat	cytosol	62.66	63.45
TraesCS1B01G309200.1	Wheat	cytosol	62.12	63.14
TraesCS1D01G298300.1	Wheat	nucleus	63.2	62.86
HORVU1Hr1G070120.3	Barley	nucleus	62.84	56.63
GSMUA_Achr8P02810_001	Banana	mitochondrion	33.75	35.47
KRH76097	Soybean	nucleus	33.39	33.27
KRH65464	Soybean	nucleus	33.39	33.21
KRG94824	Soybean	cytosol	27.65	32.22
Zm00001d007164_P001	Maize	nucleus	31.96	32.13
KRH00407	Soybean	nucleus	32.5	31.64
PGSC0003DMT400068339	Potato	nucleus	32.32	31.58
AT3G51720.1	Thale cress	nucleus	22.98	31.45
CDY70507	Canola	cytosol, nucleus, plastid	24.42	31.41
Bra017122.1-P	Field mustard	nucleus	28.37	31.16
CDY18389	Canola	nucleus	28.19	31.09
Solyc09g042710.2.1	Tomato	nucleus	31.6	30.72
Zm00001d047516_P001	Maize	nucleus	29.8	30.46
KRH40785	Soybean	nucleus	26.57	30.2
CDX78029	Canola	nucleus	22.08	30.0
AT2G38370.2	Thale cress	nucleus	28.9	29.87
Bra036780.1-P	Field mustard	nucleus	21.9	29.76
CDY65893	Canola	nucleus	25.85	29.03
CDY07266	Canola	cytosol, mitochondrion	8.44	29.01
CDX73702	Canola	nucleus	21.36	28.81
Bra000057.1-P	Field mustard	nucleus	25.13	28.69
CDY04348	Canola	nucleus	14.18	28.62
CDY07733	Canola	cytosol	16.88	28.06
OQU78181	Sorghum	nucleus	68.58	27.72
CDY19552	Canola	mitochondrion	9.69	27.0
VIT_13s0067g02400.t01	Wine grape	nucleus	25.49	26.59
PGSC0003DMT400074781	Potato	nucleus	23.52	26.31
Solyc06g050350.2.1	Tomato	nucleus	23.7	25.43
CDY58310	Canola	nucleus	12.03	25.28
CDY11490	Canola	nucleus	12.03	25.28
KRH31225	Soybean	cytosol	25.31	25.18
KRG97647	Soybean	plastid	24.78	24.64
KRH73215	Soybean	cytosol	23.34	23.38
VIT_08s0058g01020.t01	Wine grape	cytosol	34.83	23.07
KRH14870	Soybean	nucleus	24.24	23.0
Bra000190.1-P	Field mustard	nucleus	19.57	23.0
CDY07602	Canola	nucleus	19.57	23.0
CDX93176	Canola	cytosol	15.62	22.54
CDY70964	Canola	cytosol	7.0	22.41
CDY24901	Canola	cytosol	19.03	22.36
CDY06986	Canola	cytosol	17.24	21.24
Bra016990.1-P	Field mustard	cytosol	17.24	21.24
AT3G56270.1	Thale cress	cytosol	16.7	20.85
Bra007760.1-P	Field mustard	nucleus	11.85	20.56
AT2G40480.1	Thale cress	cytosol	19.03	20.46
CDX72151	Canola	cytosol	14.9	19.67
Bra039972.1-P	Field mustard	cytosol	8.08	18.0
Bra007233.1-P	Field mustard	cytosol	14.54	16.95
CDY27228	Canola	cytosol	14.18	16.53
CDY12396	Canola	cytosol, endoplasmic reticulum, nucleus	9.16	15.13

Protein Annotations

EnsemblPlants:Zm00001d010610_P001	EnsemblPlants:Zm00001d010610_T001	EnsemblPlantsGene:Zm00001d010610	InterPro:Web	ncoils:Coil	PANTHER:PTHR32054
PANTHER:PTHR32054:SF14	PFAM:PF05701	ProteinID:AQK94451.1	SEG:seg	UniParc:UPI000221D65A	UniProt:K7VWH0
MapMan:35.1	:	:	:	:	:

Description

Putative DUF827 domain containing family protein

Coordinates

chr8:+:121822415..121825887

Molecular Weight (calculated)

61522.9 Da

IEP (calculated)

10.286

GRAVY (calculated)

-0.557

Length

557 amino acids

Sequence
(BLAST)

001: MAEVAARRAV GVPAGGGGDQ ANLAAVAAAM RGRGEVDTSS PFQSVRQAVD LFGGGAAAVS QWRHPQAPPR VHLRPEEEEL MKVEEQTVKL EMELFVKEKE
101: TFKVLKELQE TKQVIDGLKI QIEKVTWEDT NAAKGHADTG MVHPLPAVEQ NTEPPVQSAK GTQSPLTTLI KLNQAKAFLN TDTVNMLKSQ IQKEKGSLEK
201: TRERLQFNLG KASSLEADLT KTVARLQAAK APQPVLEPSE IWLQMKHLNA DKARHKKASE DLRNEICELT AAIEHTRSKT KTLQFRILMA EKLKEASQRG
301: ESVALAEMEK LSNGRDPNGS TSDAVTLSVE EHSTLVLKAQ EADGAARKKV DAAMQGLDQA NRCKLELLER VEEAMAAVET SRKALEEAQR REESETKAKL
401: VAEETLRKLR SDQIIQNWRP TNSSSVKFKN TALLAPRRAA AGAGIYDVNG LSLVAAGPNS VKTVSIGQIL SMKLDRELEM TRTTTTSARK KKVSLGQILS
501: QKYEMFSPLR IDHDCASHRQ FQQPRRKRMG FVVYALLLAR QRHRRRKAAS CTRGGLS

Best Arabidopsis Sequence Match ( AT2G38370.1 )
(BLAST)

001: MAEFPEPGTV NPDSDLSNGR AEKPEIDTSA PFESVREAAT RFGGFGFWRP SLNKLPDASQ ENIQEPDIMG LKAQAFELQR ELIVKERETL EVLKELEATK
101: ATVLKLQQRN EAYEEDTLRE EVDSHIKPAG VVLKDLSQAK MNLCKIASIR ESVEQLKNKL NEERAALEKT RERLMEKSLK VFSLEEEEVR VRFAKEGQTG
201: EKDLGMLNEV QRLSRQAQEV KKTGENAELE VVKAMAETES TRDKIRTAKI RLVAARKMKE AAREAEAVAI AEIEAVTGSM NVGKAEAVTI SAEEYSVLAR
301: SARDAEEEAR KRVEDAMSRV EEANVSKKDV LKKVDEAAQE IETSKRVLEE AVERVDAANA SKIEAEEALR KWRSENGQRR RLSSSVNNTS KFKSRRETTT
401: RLMDVNGLHL TYDVVDGSSS SSTVPVLKPT MSIGQILSKK LLLAEDSDMN VANERRKMSL GQMLAKNSSS DKTVSKRSEG KENEKRTKTR KRKSFGFAKI
501: SVLLNKESKN KKKKKKIALN LR

Arabidopsis Description

Plant protein of unknown function (DUF827) [Source:TAIR;Acc:AT2G38370]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.