Factsheet for Solyc09g042710.2.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400068339	Potato	nucleus	93.89	94.39
KRH76097	Soybean	nucleus	56.37	57.78
KRH65464	Soybean	nucleus	54.97	56.25
KRG94824	Soybean	cytosol	45.03	53.97
KRH40785	Soybean	nucleus	45.03	52.65
KRH00407	Soybean	nucleus	52.53	52.62
AT2G38370.2	Thale cress	nucleus	41.88	44.53
CDY19552	Canola	mitochondrion	15.53	44.5
CDY07733	Canola	cytosol	26.0	44.48
AT3G51720.1	Thale cress	nucleus	31.59	44.47
GSMUA_Achr8P21300_001	Banana	nucleus	33.16	44.39
CDY70507	Canola	cytosol, nucleus, plastid	33.51	44.34
CDX78029	Canola	nucleus	31.59	44.15
Bra036780.1-P	Field mustard	nucleus	31.24	43.66
CDX73702	Canola	nucleus	31.41	43.58
GSMUA_Achr3P09860_001	Banana	nucleus	31.41	43.17
Bra017122.1-P	Field mustard	nucleus	37.87	42.8
CDY18389	Canola	nucleus	37.7	42.77
CDY65893	Canola	nucleus	37.0	42.74
Os03t0339700-01	Rice	nucleus	40.14	42.28
CDY04348	Canola	nucleus	20.07	41.67
Bra000057.1-P	Field mustard	nucleus	35.25	41.39
CDY07266	Canola	cytosol, mitochondrion	11.52	40.74
EER92305	Sorghum	nucleus	38.74	40.73
Os07t0677900-01	Rice	nucleus	36.65	40.46
VIT_08s0058g01020.t01	Wine grape	cytosol	57.59	39.24
Zm00001d007164_P001	Maize	nucleus	37.17	38.45
Zm00001d047516_P001	Maize	nucleus	36.47	38.35
EER97734	Sorghum	nucleus	37.87	37.54
Solyc06g050350.2.1	Tomato	nucleus	33.86	37.38
TraesCS2A01G106600.1	Wheat	nucleus	38.57	36.59
GSMUA_Achr8P02810_001	Banana	mitochondrion	32.98	35.66
HORVU2Hr1G018380.4	Barley	nucleus	38.92	34.79
TraesCS2B01G124200.1	Wheat	nucleus	37.87	34.61
TraesCS2D01G107200.1	Wheat	nucleus	37.52	34.57
TraesCS1B01G309200.1	Wheat	cytosol	31.94	33.39
CDY11490	Canola	nucleus	15.36	33.21
CDY58310	Canola	nucleus	15.36	33.21
Os05t0476100-01	Rice	cytosol, nucleus, plastid	32.64	33.04
TraesCS1A01G299400.1	Wheat	cytosol	31.41	32.73
TraesCS1D01G298300.1	Wheat	nucleus	31.41	32.14
Zm00001d010610_P001	Maize	cytosol	30.72	31.6
CDY70964	Canola	cytosol	9.25	30.46
HORVU1Hr1G070120.3	Barley	nucleus	31.24	28.96
Bra007760.1-P	Field mustard	nucleus	15.36	27.41
Bra039972.1-P	Field mustard	cytosol	10.47	24.0
CDY12396	Canola	cytosol, endoplasmic reticulum, nucleus	11.87	20.18
OQU78181	Sorghum	nucleus	27.57	11.47

Protein Annotations

EnsemblPlants:Solyc09g042710.2.1	EnsemblPlantsGene:Solyc09g042710.2	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005829	GO:GO:0008150	GO:GO:0009903	GO:GO:0009904	GO:GO:0009987	GO:GO:0016043
InterPro:Web	ncoils:Coil	PANTHER:PTHR32054	PANTHER:PTHR32054:SF4	PFAM:PF05701	SEG:seg
UniParc:UPI000276CB2A	UniProt:K4CSX4	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chr9:-:25170985..25173931

Molecular Weight (calculated)

63721.2 Da

IEP (calculated)

9.027

GRAVY (calculated)

-0.633

Length

573 amino acids

Sequence
(BLAST)

001: MDATEMDSVI LVEKKENACV KAEIDTSAPF ESVKEAATRF GGIGFWKPTL HKSFGDSSQV AEEKVDIAKV EEQAVQLEKD LIVKERETLE VLKELESTKV
101: LIEELKSKLQ KEAYEGNALL GADAEAKDVH LAHESADKEN SEKVLSNNQD KNSGLDLCPS SAPGLILLEL KQAKLNLTRT TSDLADIRTI VESYNKKIEK
201: ERILLEKTRQ RLSSSSTQIS SLEEELNKTK EKLKLVNHAE GGGPCDPVDL TRELQRLTAE TKQFKKVGEA AKSEVLRAMP EIEHTKTRIK IAEIRLVAAK
301: KMKAAARAAE AVALAEIKAI SSSENSFVTL RREPEEGVTL TFEEYSSLLS KAQDAEEASK QREVDAMMLV DEAVVSKTEI LKKVEEATEE VKVSKKALEE
401: ALSRVEAANE GKLAVEEALR KWRSENGKRR RSVQNSSKFK NPSSSQHRKD SVLVDVNGLT LVNDELKPVL KTTLSIGQIL NKKLLLTEEF ENGFRAGKKA
501: GKRTVSLAQM LGKPTGELQS SRKDEKENGL KHHLPKKRKK FGFAKISHLV TQHSKKKKQH CQHNASLRCT SAE

Best Arabidopsis Sequence Match ( AT2G38370.2 )
(BLAST)

001: MVVKTGFPIT DSSSSASMAE FPEPGTVNPD SDLSNGRAEK PEIDTSAPFE SVREAATRFG GFGFWRPSLN KLPDASQENI QEPDIMGLKA QAFELQRELI
101: VKERETLEVL KELEATKATV LKLQQRNEAY EEDTLREEVD SHIKPAGVVL KDLSQAKMNL CKIASIRESV EQLKNKLNEE RAALEKTRER LMEKSLKVFS
201: LEEEEVRVRF AKEGQTGEKD LGMLNEVQRL SRQAQEVKKT GENAELEVVK AMAETESTRD KIRTAKIRLV AARKMKEAAR EAEAVAIAEI EAVTGSMNVG
301: KAEAVTISAE EYSVLARSAR DAEEEARKRV EDAMSRVEEA NVSKKDVLKK VDEAAQEIET SKRVLEEAVE RVDAANASKI EAEEALRKWR SENGQRRRLS
401: SSVNNTSKFK SRRETTTRLM DVNGLHLTYD VVDGSSSSST VPVLKPTMSI GQILSKKLLL AEDSDMNVAN ERRKMSLGQM LAKNSSSDKT VSKRSEGKEN
501: EKRTKTRKRK SFGFAKISVL LNKESKNKKK KKKIALNLR

Arabidopsis Description

Plant protein of unknown function (DUF827) [Source:TAIR;Acc:AT2G38370]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.