Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- vacuole 1
- cytosol 3
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY70964 | Canola | cytosol | 68.0 | 97.7 |
| Bra007760.1-P | Field mustard | nucleus | 35.6 | 27.73 |
| Bra036780.1-P | Field mustard | nucleus | 41.2 | 25.12 |
| AT3G51720.1 | Thale cress | nucleus | 31.6 | 19.41 |
| Bra017122.1-P | Field mustard | nucleus | 22.8 | 11.24 |
| KRH40785 | Soybean | nucleus | 22.0 | 11.22 |
| KRH76097 | Soybean | nucleus | 24.8 | 11.09 |
| KRH65464 | Soybean | nucleus | 24.8 | 11.07 |
| Bra000057.1-P | Field mustard | nucleus | 21.6 | 11.07 |
| KRG94824 | Soybean | cytosol | 20.8 | 10.88 |
| PGSC0003DMT400068339 | Potato | nucleus | 24.0 | 10.53 |
| Solyc09g042710.2.1 | Tomato | nucleus | 24.0 | 10.47 |
| KRH00407 | Soybean | nucleus | 23.6 | 10.31 |
| Os05t0476100-01 | Rice | cytosol, nucleus, plastid | 20.0 | 8.83 |
| TraesCS2A01G106600.1 | Wheat | nucleus | 21.2 | 8.77 |
| TraesCS1A01G299400.1 | Wheat | cytosol | 19.2 | 8.73 |
| Os07t0677900-01 | Rice | nucleus | 18.0 | 8.67 |
| TraesCS2D01G107200.1 | Wheat | nucleus | 20.8 | 8.36 |
| TraesCS2B01G124200.1 | Wheat | nucleus | 20.8 | 8.29 |
| TraesCS1D01G298300.1 | Wheat | nucleus | 18.4 | 8.21 |
| TraesCS1B01G309200.1 | Wheat | cytosol | 18.0 | 8.21 |
| Zm00001d010610_P001 | Maize | cytosol | 18.0 | 8.08 |
| EER97734 | Sorghum | nucleus | 18.4 | 7.96 |
| Os03t0339700-01 | Rice | nucleus | 17.2 | 7.9 |
| Zm00001d047516_P001 | Maize | nucleus | 17.2 | 7.89 |
| HORVU2Hr1G018380.4 | Barley | nucleus | 20.0 | 7.8 |
| Zm00001d007164_P001 | Maize | nucleus | 17.2 | 7.76 |
| EER92305 | Sorghum | nucleus | 16.8 | 7.71 |
| GSMUA_Achr3P09860_001 | Banana | nucleus | 12.8 | 7.67 |
| GSMUA_Achr8P02810_001 | Banana | mitochondrion | 16.0 | 7.55 |
| HORVU1Hr1G070120.3 | Barley | nucleus | 18.4 | 7.44 |
| VIT_08s0058g01020.t01 | Wine grape | cytosol | 24.8 | 7.37 |
| GSMUA_Achr8P21300_001 | Banana | nucleus | 12.4 | 7.24 |
| Bra000190.1-P | Field mustard | nucleus | 13.2 | 6.96 |
| Bra007233.1-P | Field mustard | cytosol | 13.2 | 6.9 |
| Bra016990.1-P | Field mustard | cytosol | 12.0 | 6.64 |
| OQU78181 | Sorghum | nucleus | 17.2 | 3.12 |
Protein Annotations
| EnsemblPlants:Bra039972.1 | EnsemblPlants:Bra039972.1-P | EnsemblPlantsGene:Bra039972 | Gene3D:3.40.1020.10 | InterPro:IPR001721 | InterPro:IPR038110 |
| InterPro:TD_ACT-like | InterPro:TD_ACT-like_sf | KEGG:00260+4.3.1.19 | KEGG:00290+4.3.1.19 | ncoils:Coil | PANTHER:PTHR32054 |
| PANTHER:PTHR32054:SF4 | PFAM:PF00585 | SEG:seg | SUPFAM:SSF55021 | UniParc:UPI0002544233 | UniProt:M4FFU8 |
| MapMan:35.1 | : | : | : | : | : |
Description
AT3G51720 (E=3e-019) | unknown protein
Coordinates
chrA04:+:13158322..13162830
Molecular Weight (calculated)
27861.3 Da
IEP (calculated)
5.146
GRAVY (calculated)
-0.164
Length
250 amino acids
Sequence
(BLAST)
(BLAST)
001: MGGRTSVEEE VLCQFTFPER AGALMNFLDS FSPRWNIFIN IITHIVVGFS FVGDIDTSAP FESIRSSRRT IEEGLERVNS AKMEAEEEEE TQWQWSERRR
101: RSSSSYKGKY TNRRETVLMD VNGLDMMMNG DGTASSVAVL KPAMSIGQIL GRKLLLANES AMMINGRVSL GTTTADALNN IQHALRFANQ DVAQAGNNHN
201: HFDSGITYIL LIQDHAVSGS DVCKCITPDV LDLEVGRTAV MKIMVQVLWF
101: RSSSSYKGKY TNRRETVLMD VNGLDMMMNG DGTASSVAVL KPAMSIGQIL GRKLLLANES AMMINGRVSL GTTTADALNN IQHALRFANQ DVAQAGNNHN
201: HFDSGITYIL LIQDHAVSGS DVCKCITPDV LDLEVGRTAV MKIMVQVLWF
001: MNSVQLPTAQ SSLRSHIHRP SKPVVGFTHF SSRSRIAVAV LSRDETSMTP PPPKLPLPRL KVSPNSLQYP AGYLGAVPER TNEAENGSIA EAMEYLTNIL
101: STKVYDIAIE SPLQLAKKLS KRLGVRMYLK REDLQPVFSF KLRGAYNMMV KLPADQLAKG VICSSAGNHA QGVALSASKL GCTAVIVMPV TTPEIKWQAV
201: ENLGATVVLF GDSYDQAQAH AKIRAEEEGL TFIPPFDHPD VIAGQGTVGM EITRQAKGPL HAIFVPVGGG GLIAGIAAYV KRVSPEVKII GVEPADANAM
301: ALSLHHGERV ILDQVGGFAD GVAVKEVGEE TFRISRNLMD GVVLVTRDAI CASIKDMFEE KRNILEPAGA LALAGAEAYC KYYGLKDVNV VAITSGANMN
401: FDKLRIVTEL ANVGRQQEAV LATLMPEKPG SFKQFCELVG PMNISEFKYR CSSEKEAVVL YSVGVHTAGE LKALQKRMES SQLKTVNLTT SDLVKDHLRY
501: LMGGRSTVGD EVLCRFTFPE RPGALMNFLD SFSPRWNITL FHYRGQGETG ANVLVGIQVP EQEMEEFKNR AKALGYDYFL VSDDDYFKLL MH
101: STKVYDIAIE SPLQLAKKLS KRLGVRMYLK REDLQPVFSF KLRGAYNMMV KLPADQLAKG VICSSAGNHA QGVALSASKL GCTAVIVMPV TTPEIKWQAV
201: ENLGATVVLF GDSYDQAQAH AKIRAEEEGL TFIPPFDHPD VIAGQGTVGM EITRQAKGPL HAIFVPVGGG GLIAGIAAYV KRVSPEVKII GVEPADANAM
301: ALSLHHGERV ILDQVGGFAD GVAVKEVGEE TFRISRNLMD GVVLVTRDAI CASIKDMFEE KRNILEPAGA LALAGAEAYC KYYGLKDVNV VAITSGANMN
401: FDKLRIVTEL ANVGRQQEAV LATLMPEKPG SFKQFCELVG PMNISEFKYR CSSEKEAVVL YSVGVHTAGE LKALQKRMES SQLKTVNLTT SDLVKDHLRY
501: LMGGRSTVGD EVLCRFTFPE RPGALMNFLD SFSPRWNITL FHYRGQGETG ANVLVGIQVP EQEMEEFKNR AKALGYDYFL VSDDDYFKLL MH
Arabidopsis Description
OMR1Threonine dehydratase [Source:UniProtKB/TrEMBL;Acc:A0A178VHF4]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.