Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY18389 | Canola | nucleus | 84.81 | 85.15 |
| Bra000057.1-P | Field mustard | nucleus | 54.83 | 56.97 |
| AT2G38370.2 | Thale cress | nucleus | 60.35 | 56.77 |
| Bra036780.1-P | Field mustard | nucleus | 35.31 | 43.66 |
| KRH76097 | Soybean | nucleus | 44.77 | 40.61 |
| KRH65464 | Soybean | nucleus | 43.59 | 39.46 |
| KRH40785 | Soybean | nucleus | 37.87 | 39.18 |
| PGSC0003DMT400068339 | Potato | nucleus | 43.59 | 38.77 |
| Solyc09g042710.2.1 | Tomato | nucleus | 42.8 | 37.87 |
| KRG94824 | Soybean | cytosol | 34.52 | 36.61 |
| KRH00407 | Soybean | nucleus | 40.63 | 36.01 |
| Os03t0339700-01 | Rice | nucleus | 35.5 | 33.09 |
| GSMUA_Achr3P09860_001 | Banana | nucleus | 26.82 | 32.61 |
| EER92305 | Sorghum | nucleus | 34.91 | 32.48 |
| GSMUA_Achr8P21300_001 | Banana | nucleus | 26.82 | 31.78 |
| Zm00001d047516_P001 | Maize | nucleus | 34.12 | 31.74 |
| Os07t0677900-01 | Rice | nucleus | 31.76 | 31.02 |
| Zm00001d007164_P001 | Maize | nucleus | 33.33 | 30.51 |
| EER97734 | Sorghum | nucleus | 33.53 | 29.41 |
| TraesCS1A01G299400.1 | Wheat | cytosol | 31.76 | 29.27 |
| TraesCS1B01G309200.1 | Wheat | cytosol | 31.56 | 29.2 |
| TraesCS1D01G298300.1 | Wheat | nucleus | 32.15 | 29.11 |
| TraesCS2A01G106600.1 | Wheat | nucleus | 34.52 | 28.97 |
| Bra000190.1-P | Field mustard | nucleus | 27.02 | 28.9 |
| Zm00001d010610_P001 | Maize | cytosol | 31.16 | 28.37 |
| Os05t0476100-01 | Rice | cytosol, nucleus, plastid | 31.36 | 28.09 |
| TraesCS2B01G124200.1 | Wheat | nucleus | 34.71 | 28.07 |
| TraesCS2D01G107200.1 | Wheat | nucleus | 34.12 | 27.81 |
| GSMUA_Achr8P02810_001 | Banana | mitochondrion | 28.8 | 27.55 |
| HORVU2Hr1G018380.4 | Barley | nucleus | 34.71 | 27.46 |
| Bra016990.1-P | Field mustard | cytosol | 23.87 | 26.77 |
| VIT_08s0058g01020.t01 | Wine grape | cytosol | 42.01 | 25.33 |
| HORVU1Hr1G070120.3 | Barley | nucleus | 30.77 | 25.24 |
| Bra007760.1-P | Field mustard | nucleus | 15.58 | 24.61 |
| Bra039972.1-P | Field mustard | cytosol | 11.24 | 22.8 |
| Bra007233.1-P | Field mustard | cytosol | 20.71 | 21.97 |
| OQU78181 | Sorghum | nucleus | 26.63 | 9.8 |
Protein Annotations
Description
AT2G38370 (E=4e-115) | unknown protein
Coordinates
chrA04:-:16502249..16503993
Molecular Weight (calculated)
56836.0 Da
IEP (calculated)
9.600
GRAVY (calculated)
-0.770
Length
507 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEPSPSGSA IEPRSINPDS NPSLTANVRA EIDTSSPFVS VREAANRFGG FGFWRPHSSE PLQDNVKEGE LQNYLMVKEC ETLDVLKELE LTKARIIDLN
101: SKLQQKKNEE EELREEVQSH IKPAGVVLQD LNKAKMNLCK RTVDLSGLRR SVEILNKQLK EEKDALEKTR ERVMQKSLKV ISLEEEEEAK KGETSEKDLE
201: NNALRMINEV RRLGCEAQEF KKAGEKAMEE IKHTREKVKT VKIKLVAARR MKEAARAAEA VAIAEIKAVK GSENTVTISA EEYAKLTLDA REAEEEARKR
301: VEDAMSRVEE ANVSEMDNLK RADEAAKEVE ASKRAFEEAV ERTETANARK LEAEEALRDL KSEKGERRRS SVNNTAKFKT RRETITTNSL MDVNGLHLTY
401: DFVPGPSSSS VPVLKPAMSI GQILSKKLLV ADDSDMSVVK ERCKMSLGQM LAKNSNGDGA LSKKSEGKEN EKRSVKRKNI GFAKIVLLLN KESKNKKKSK
501: KIGLNLR
101: SKLQQKKNEE EELREEVQSH IKPAGVVLQD LNKAKMNLCK RTVDLSGLRR SVEILNKQLK EEKDALEKTR ERVMQKSLKV ISLEEEEEAK KGETSEKDLE
201: NNALRMINEV RRLGCEAQEF KKAGEKAMEE IKHTREKVKT VKIKLVAARR MKEAARAAEA VAIAEIKAVK GSENTVTISA EEYAKLTLDA REAEEEARKR
301: VEDAMSRVEE ANVSEMDNLK RADEAAKEVE ASKRAFEEAV ERTETANARK LEAEEALRDL KSEKGERRRS SVNNTAKFKT RRETITTNSL MDVNGLHLTY
401: DFVPGPSSSS VPVLKPAMSI GQILSKKLLV ADDSDMSVVK ERCKMSLGQM LAKNSNGDGA LSKKSEGKEN EKRSVKRKNI GFAKIVLLLN KESKNKKKSK
501: KIGLNLR
001: MVVKTGFPIT DSSSSASMAE FPEPGTVNPD SDLSNGRAEK PEIDTSAPFE SVREAATRFG GFGFWRPSLN KLPDASQENI QEPDIMGLKA QAFELQRELI
101: VKERETLEVL KELEATKATV LKLQQRNEAY EEDTLREEVD SHIKPAGVVL KDLSQAKMNL CKIASIRESV EQLKNKLNEE RAALEKTRER LMEKSLKVFS
201: LEEEEVRVRF AKEGQTGEKD LGMLNEVQRL SRQAQEVKKT GENAELEVVK AMAETESTRD KIRTAKIRLV AARKMKEAAR EAEAVAIAEI EAVTGSMNVG
301: KAEAVTISAE EYSVLARSAR DAEEEARKRV EDAMSRVEEA NVSKKDVLKK VDEAAQEIET SKRVLEEAVE RVDAANASKI EAEEALRKWR SENGQRRRLS
401: SSVNNTSKFK SRRETTTRLM DVNGLHLTYD VVDGSSSSST VPVLKPTMSI GQILSKKLLL AEDSDMNVAN ERRKMSLGQM LAKNSSSDKT VSKRSEGKEN
501: EKRTKTRKRK SFGFAKISVL LNKESKNKKK KKKIALNLR
101: VKERETLEVL KELEATKATV LKLQQRNEAY EEDTLREEVD SHIKPAGVVL KDLSQAKMNL CKIASIRESV EQLKNKLNEE RAALEKTRER LMEKSLKVFS
201: LEEEEVRVRF AKEGQTGEKD LGMLNEVQRL SRQAQEVKKT GENAELEVVK AMAETESTRD KIRTAKIRLV AARKMKEAAR EAEAVAIAEI EAVTGSMNVG
301: KAEAVTISAE EYSVLARSAR DAEEEARKRV EDAMSRVEEA NVSKKDVLKK VDEAAQEIET SKRVLEEAVE RVDAANASKI EAEEALRKWR SENGQRRRLS
401: SSVNNTSKFK SRRETTTRLM DVNGLHLTYD VVDGSSSSST VPVLKPTMSI GQILSKKLLL AEDSDMNVAN ERRKMSLGQM LAKNSSSDKT VSKRSEGKEN
501: EKRTKTRKRK SFGFAKISVL LNKESKNKKK KKKIALNLR
Arabidopsis Description
Plant protein of unknown function (DUF827) [Source:TAIR;Acc:AT2G38370]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.