Factsheet for Zm00001d007164_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d005003_P002
Zm00001d008278_P001
Zm00001d010649_P001
Zm00001d013780_P001
Zm00001d014150_P005
Zm00001d018033_P001
Zm00001d028948_P001
Zm00001d033099_P001
Zm00001d033980_P001
Zm00001d037234_P005
Zm00001d038543_P004
Zm00001d038545_P001
Zm00001d041430_P001
Zm00001d043144_P001
Zm00001d047597_P001
Zm00001d052263_P001
Zm00001d052415_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G56270.1	Zm00001d013780_P001	AT2G04630.1	21798944
AT3G56270.1	Zm00001d033099_P001	AT2G04630.1	21798944
AT3G56270.1	Zm00001d005003_P002	AT2G41090.1	17360592
AT3G56270.1	Zm00001d008278_P001	AT2G41090.1	17360592
AT3G56270.1	Zm00001d010649_P001	AT2G41090.1	17360592
AT3G56270.1	Zm00001d028948_P001	AT2G41090.1	17360592
AT3G56270.1	Zm00001d038543_P004	AT2G41090.1	17360592
AT3G56270.1	Zm00001d038545_P001	AT2G41090.1	17360592
AT3G56270.1	Zm00001d041430_P001	AT2G41090.1	17360592
AT3G56270.1	Zm00001d043144_P001	AT2G41090.1	17360592
AT3G56270.1	Zm00001d047597_P001	AT2G41090.1	17360592
AT3G56270.1	Zm00001d052415_P001	AT2G41090.1	17360592
AT3G56270.1	Zm00001d005003_P002	AT2G41100.1	17360592
AT3G56270.1	Zm00001d008278_P001	AT2G41100.1	17360592
AT3G56270.1	Zm00001d010649_P001	AT2G41100.1	17360592
AT3G56270.1	Zm00001d028948_P001	AT2G41100.1	17360592
AT3G56270.1	Zm00001d038543_P004	AT2G41100.1	17360592
AT3G56270.1	Zm00001d038545_P001	AT2G41100.1	17360592
AT3G56270.1	Zm00001d041430_P001	AT2G41100.1	17360592
AT3G56270.1	Zm00001d043144_P001	AT2G41100.1	17360592
AT3G56270.1	Zm00001d047597_P001	AT2G41100.1	17360592
AT3G56270.1	Zm00001d052415_P001	AT2G41100.1	17360592
AT3G56270.1	Zm00001d014150_P005	AT3G01180.1	21798944
AT3G56270.1	Zm00001d018033_P001	AT3G01180.1	21798944
AT3G56270.1	Zm00001d037234_P005	AT3G01180.1	21798944
AT3G56270.1	Zm00001d052263_P001	AT3G01180.1	21798944
AT3G56270.1	Zm00001d033980_P001	AT4G14640.1	17360592
AT3G56270.1	Zm00001d005003_P002	AT5G21274.1	17360592
AT3G56270.1	Zm00001d008278_P001	AT5G21274.1	17360592
AT3G56270.1	Zm00001d010649_P001	AT5G21274.1	17360592
AT3G56270.1	Zm00001d028948_P001	AT5G21274.1	17360592
AT3G56270.1	Zm00001d038543_P004	AT5G21274.1	17360592
AT3G56270.1	Zm00001d038545_P001	AT5G21274.1	17360592
AT3G56270.1	Zm00001d041430_P001	AT5G21274.1	17360592
AT3G56270.1	Zm00001d043144_P001	AT5G21274.1	17360592
AT3G56270.1	Zm00001d047597_P001	AT5G21274.1	17360592
AT3G56270.1	Zm00001d052415_P001	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER97734	Sorghum	nucleus	79.96	76.64
Os07t0677900-01	Rice	nucleus	57.76	61.66
TraesCS2A01G106600.1	Wheat	nucleus	62.64	57.45
Zm00001d047516_P001	Maize	nucleus	55.23	56.15
TraesCS2D01G107200.1	Wheat	nucleus	62.64	55.79
TraesCS2B01G124200.1	Wheat	nucleus	62.09	54.86
HORVU2Hr1G018380.4	Barley	nucleus	62.45	53.98
GSMUA_Achr8P21300_001	Banana	nucleus	34.12	44.16
GSMUA_Achr3P09860_001	Banana	nucleus	32.13	42.69
KRH76097	Soybean	nucleus	42.24	41.86
KRH65464	Soybean	nucleus	41.52	41.07
KRH00407	Soybean	nucleus	39.17	37.94
KRG94824	Soybean	cytosol	32.67	37.87
PGSC0003DMT400068339	Potato	nucleus	38.63	37.54
Solyc09g042710.2.1	Tomato	nucleus	38.45	37.17
KRH40785	Soybean	nucleus	32.67	36.94
AT3G51720.1	Thale cress	nucleus	26.35	35.87
AT2G38370.2	Thale cress	nucleus	33.57	34.51
CDY70507	Canola	cytosol, nucleus, plastid	26.53	33.95
CDX78029	Canola	nucleus	25.09	33.9
Bra036780.1-P	Field mustard	nucleus	25.09	33.9
CDY18389	Canola	nucleus	30.87	33.86
CDX73702	Canola	nucleus	25.09	33.66
CDY07733	Canola	cytosol	20.22	33.43
Bra017122.1-P	Field mustard	nucleus	30.51	33.33
CDY65893	Canola	nucleus	29.78	33.27
Bra000057.1-P	Field mustard	nucleus	28.88	32.79
VIT_13s0067g02400.t01	Wine grape	nucleus	31.59	32.77
CDX93176	Canola	cytosol	22.74	32.64
Zm00001d010610_P001	Maize	cytosol	32.13	31.96
CDY19552	Canola	mitochondrion	11.37	31.5
CDY04348	Canola	nucleus	15.52	31.16
CDY07266	Canola	cytosol, mitochondrion	9.03	30.86
PGSC0003DMT400074781	Potato	nucleus	27.26	30.32
KRH31225	Soybean	cytosol	30.51	30.18
CDY24901	Canola	cytosol	25.63	29.96
CDY07602	Canola	nucleus	25.09	29.32
Bra000190.1-P	Field mustard	nucleus	25.09	29.32
CDY06986	Canola	cytosol	23.65	28.98
Bra016990.1-P	Field mustard	cytosol	23.65	28.98
Solyc06g050350.2.1	Tomato	nucleus	27.08	28.9
KRG97647	Soybean	plastid	28.88	28.57
VIT_08s0058g01020.t01	Wine grape	cytosol	42.96	28.3
CDY11490	Canola	nucleus	13.36	27.92
CDY58310	Canola	nucleus	13.36	27.92
AT3G56270.1	Thale cress	cytosol	22.38	27.8
AT2G40480.1	Thale cress	cytosol	25.81	27.61
CDX72151	Canola	cytosol	20.94	27.49
KRH73215	Soybean	cytosol	26.9	26.8
KRH14870	Soybean	nucleus	27.8	26.24
Bra007760.1-P	Field mustard	nucleus	14.08	24.3
Bra007233.1-P	Field mustard	cytosol	20.58	23.85
CDY27228	Canola	cytosol	20.58	23.85
CDY70964	Canola	cytosol	7.4	23.56
CDY12396	Canola	cytosol, endoplasmic reticulum, nucleus	11.55	18.99
Bra039972.1-P	Field mustard	cytosol	7.76	17.2

Protein Annotations

EMBL:EU970831	EnsemblPlants:Zm00001d007164_P001	EnsemblPlants:Zm00001d007164_T001	EnsemblPlantsGene:Zm00001d007164	EntrezGene:100277855	InterPro:Web
ncoils:Coil	PANTHER:PTHR32054	PANTHER:PTHR32054:SF4	PFAM:PF05701	ProteinID:ONM26197.1	SEG:seg
UniParc:UPI000182F090	UniProt:B6U0R6	MapMan:35.1	:	:	:

Description

WEB family protein

Coordinates

chr2:+:223630081..223632579

Molecular Weight (calculated)

60823.1 Da

IEP (calculated)

6.548

GRAVY (calculated)

-0.611

Length

554 amino acids

Sequence
(BLAST)

001: MNDAGEAEAQ ELAPPGASAA AGLQGRAEVD TSTPFKSVRE AVDRFGGSAA WSSDLIKRMF ALPPSPKKQE GGDELADLEE QTAQLEKELG VKERETLDVL
101: KELESTKKVV ADLKLKIQNE GAGAFCIPEE SVRGQAELPT AAEEVAEVQP ENAETDVVMG ALHVQLHQSP GTSVLKGLEQ AKANLNRTTS DLAAIRASVE
201: SLRNDIAKER ILVERSREKV CANTTLIASL EDELNRTAQK LQTLRDLQRR RDDQSDIFIE IKKMTSELEQ LRNAASAAKS EAAMLSAEIE QMRASIGTAE
301: VRCRAARKIE EAARAAEALA LAEIKILLRN EASVEDLQGM EDVSLSLEEY SELAAKAQEA DERSRKKIDA AMVQVDEANR TESDSLRKLE EARLQVEECK
401: KALQDAQKRV DAANRGKSAV EEALRRCRST TGHRRRSVHD PPRFKHPAPR SRDSQNMDIV GVSKGPLKPT LSIGQILSMK LMGPDGYDKS VWDDASEAST
501: MSLGHILNRR HAVVYSSDAT AQKKFPGKRK KFAFTGLSIF LARQAKRKKE KGSH

Best Arabidopsis Sequence Match ( AT2G38370.1 )
(BLAST)

001: MAEFPEPGTV NPDSDLSNGR AEKPEIDTSA PFESVREAAT RFGGFGFWRP SLNKLPDASQ ENIQEPDIMG LKAQAFELQR ELIVKERETL EVLKELEATK
101: ATVLKLQQRN EAYEEDTLRE EVDSHIKPAG VVLKDLSQAK MNLCKIASIR ESVEQLKNKL NEERAALEKT RERLMEKSLK VFSLEEEEVR VRFAKEGQTG
201: EKDLGMLNEV QRLSRQAQEV KKTGENAELE VVKAMAETES TRDKIRTAKI RLVAARKMKE AAREAEAVAI AEIEAVTGSM NVGKAEAVTI SAEEYSVLAR
301: SARDAEEEAR KRVEDAMSRV EEANVSKKDV LKKVDEAAQE IETSKRVLEE AVERVDAANA SKIEAEEALR KWRSENGQRR RLSSSVNNTS KFKSRRETTT
401: RLMDVNGLHL TYDVVDGSSS SSTVPVLKPT MSIGQILSKK LLLAEDSDMN VANERRKMSL GQMLAKNSSS DKTVSKRSEG KENEKRTKTR KRKSFGFAKI
501: SVLLNKESKN KKKKKKIALN LR

Arabidopsis Description

Plant protein of unknown function (DUF827) [Source:TAIR;Acc:AT2G38370]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.