CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH40785	Soybean	nucleus	72.03	84.08
KRG94824	Soybean	cytosol	67.31	80.54
KRH76097	Soybean	nucleus	64.34	65.83
KRH65464	Soybean	nucleus	62.94	64.29
PGSC0003DMT400068339	Potato	nucleus	52.97	53.16
Solyc09g042710.2.1	Tomato	nucleus	52.62	52.53
AT3G51720.1	Thale cress	nucleus	32.87	46.19
GSMUA_Achr8P21300_001	Banana	nucleus	34.09	45.56
CDX78029	Canola	nucleus	31.64	44.15
CDY70507	Canola	cytosol, nucleus, plastid	33.39	44.11
Bra036780.1-P	Field mustard	nucleus	31.47	43.9
CDX73702	Canola	nucleus	31.47	43.58
GSMUA_Achr3P09860_001	Banana	nucleus	31.64	43.41
CDY07733	Canola	cytosol	25.35	43.28
Os03t0339700-01	Rice	nucleus	40.91	43.01
CDY19552	Canola	mitochondrion	14.69	42.0
AT2G38370.2	Thale cress	nucleus	39.16	41.56
CDY65893	Canola	nucleus	35.49	40.93
EER92305	Sorghum	nucleus	38.99	40.92
Os07t0677900-01	Rice	nucleus	36.89	40.66
Bra017122.1-P	Field mustard	nucleus	36.01	40.63
Bra000057.1-P	Field mustard	nucleus	34.62	40.57
CDY04348	Canola	nucleus	19.41	40.22
CDY18389	Canola	nucleus	35.49	40.2
Zm00001d047516_P001	Maize	nucleus	38.11	40.0
VIT_08s0058g01020.t01	Wine grape	cytosol	58.04	39.48
Zm00001d007164_P001	Maize	nucleus	37.94	39.17
CDY07266	Canola	cytosol, mitochondrion	10.84	38.27
TraesCS2A01G106600.1	Wheat	nucleus	39.51	37.42
EER97734	Sorghum	nucleus	37.59	37.2
GSMUA_Achr8P02810_001	Banana	mitochondrion	33.92	36.6
TraesCS2B01G124200.1	Wheat	nucleus	39.51	36.04
KRG97647	Soybean	plastid	35.14	35.89
TraesCS2D01G107200.1	Wheat	nucleus	38.99	35.85
HORVU2Hr1G018380.4	Barley	nucleus	39.86	35.57
KRH31225	Soybean	cytosol	34.79	35.54
TraesCS1B01G309200.1	Wheat	cytosol	32.34	33.76
TraesCS1A01G299400.1	Wheat	cytosol	32.17	33.45
TraesCS1D01G298300.1	Wheat	nucleus	32.52	33.21
Os05t0476100-01	Rice	cytosol, nucleus, plastid	32.69	33.04
Zm00001d010610_P001	Maize	cytosol	31.64	32.5
CDY11490	Canola	nucleus	14.69	31.7
CDY58310	Canola	nucleus	14.69	31.7
KRH73215	Soybean	cytosol	30.42	31.3
KRH14870	Soybean	nucleus	31.64	30.83
CDY70964	Canola	cytosol	9.27	30.46
HORVU1Hr1G070120.3	Barley	nucleus	32.69	30.26
Bra007760.1-P	Field mustard	nucleus	14.69	26.17
Bra039972.1-P	Field mustard	cytosol	10.31	23.6
CDY12396	Canola	cytosol, endoplasmic reticulum, nucleus	11.71	19.88
OQU78181	Sorghum	nucleus	27.62	11.47

Protein Annotations

EntrezGene:100785049	MapMan:35.1	EMBL:ACUP02011442	ncoils:Coil	EnsemblPlantsGene:GLYMA_18G211800	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0008150	GO:GO:0009903
GO:GO:0009904	GO:GO:0009987	GO:GO:0016043	UniProt:K7MTS0	EnsemblPlants:KRH00407	ProteinID:KRH00407
ProteinID:KRH00407.1	PFAM:PF05701	PANTHER:PTHR32054	PANTHER:PTHR32054:SF4	UniParc:UPI0002959EB8	InterPro:Web
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr18:+:49825122..49828870

Molecular Weight (calculated)

64672.3 Da

IEP (calculated)

8.568

GRAVY (calculated)

-0.713

Length

572 amino acids

Sequence
(BLAST)

001: MLFGSVCFVM EMEAADVVET TTNHAERGLE KKNNKSGLRT EIDTSAPFES VKEAVTMFGG GYWKSPLHSN ITCVASGSEH HREEVSAEKL EEQAVVLEKE
101: LILKERETLD VLKELESTKR LVEDLKSKIQ KEESEANLNL QMGKYDKKSV VDENVEKENQ MSQLNVLQPS REGFIPYPSS TPGLILMELK QAKLNLTKTT
201: NDLADVQTSV ESLNKKLEKE RISLEKTRDR LAQNTLKISS LEEELNQTRL RLQIAKDAEI KGALDDPSDI TRELQQLSSE AENFKRMGEF AKSEVLRSMS
301: EIEQTKTMIR TAEIRLLAAR KMKEAARAAE AFALAEINAL SNHDSSPGNQ VTLSFEEYTA LMGKARDAEE QSKQRVASAT LEVDEANLAN MDILKRVEEA
401: TGQVKTSKKA LEEALERVEA ANRDKVAVEE ALRNWRSEGQ KKRSSIHNST KFKNCCLSHH RRDPRLLDVN GMHLVNDEAR PVLKPTLSIG QILSRKLLQP
501: QEFEAREGIS MKQNVSLGKM LGKQNNDRPV DRQVEKETGH KLFSTKRKKF GFARFSHILS KQKKKKPTLN LR

Best Arabidopsis Sequence Match ( AT2G38370.1 )
(BLAST)

001: MAEFPEPGTV NPDSDLSNGR AEKPEIDTSA PFESVREAAT RFGGFGFWRP SLNKLPDASQ ENIQEPDIMG LKAQAFELQR ELIVKERETL EVLKELEATK
101: ATVLKLQQRN EAYEEDTLRE EVDSHIKPAG VVLKDLSQAK MNLCKIASIR ESVEQLKNKL NEERAALEKT RERLMEKSLK VFSLEEEEVR VRFAKEGQTG
201: EKDLGMLNEV QRLSRQAQEV KKTGENAELE VVKAMAETES TRDKIRTAKI RLVAARKMKE AAREAEAVAI AEIEAVTGSM NVGKAEAVTI SAEEYSVLAR
301: SARDAEEEAR KRVEDAMSRV EEANVSKKDV LKKVDEAAQE IETSKRVLEE AVERVDAANA SKIEAEEALR KWRSENGQRR RLSSSVNNTS KFKSRRETTT
401: RLMDVNGLHL TYDVVDGSSS SSTVPVLKPT MSIGQILSKK LLLAEDSDMN VANERRKMSL GQMLAKNSSS DKTVSKRSEG KENEKRTKTR KRKSFGFAKI
501: SVLLNKESKN KKKKKKIALN LR

Arabidopsis Description

Plant protein of unknown function (DUF827) [Source:TAIR;Acc:AT2G38370]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.