CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

nucleus 2
mitochondrion 1
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plastid
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY18389	Canola	nucleus	83.14	71.29
CDY07733	Canola	cytosol	50.81	65.67
CDY65893	Canola	nucleus	63.05	55.04
AT2G38370.2	Thale cress	nucleus	64.2	51.58
CDY07266	Canola	cytosol, mitochondrion	15.7	41.98
CDY04348	Canola	nucleus	26.56	41.67
CDX78029	Canola	nucleus	36.95	39.02
CDX73702	Canola	nucleus	37.18	38.98
KRH40785	Soybean	nucleus	44.11	38.98
KRH76097	Soybean	nucleus	47.34	36.67
KRH65464	Soybean	nucleus	45.5	35.18
PGSC0003DMT400068339	Potato	nucleus	45.5	34.56
CDY19552	Canola	mitochondrion	15.94	34.5
KRG94824	Soybean	cytosol	37.41	33.89
Solyc09g042710.2.1	Tomato	nucleus	44.34	33.51
KRH00407	Soybean	nucleus	44.11	33.39
CDY11490	Canola	nucleus	19.17	31.32
CDY58310	Canola	nucleus	19.17	31.32
Os03t0339700-01	Rice	nucleus	36.26	28.86
GSMUA_Achr3P09860_001	Banana	nucleus	27.25	28.3
EER92305	Sorghum	nucleus	35.57	28.26
Zm00001d047516_P001	Maize	nucleus	34.87	27.71
GSMUA_Achr8P21300_001	Banana	nucleus	27.02	27.34
CDY70964	Canola	cytosol	10.85	27.01
Os07t0677900-01	Rice	nucleus	32.33	26.98
Zm00001d007164_P001	Maize	nucleus	33.95	26.53
EER97734	Sorghum	nucleus	34.64	25.95
TraesCS2A01G106600.1	Wheat	nucleus	35.57	25.5
TraesCS1B01G309200.1	Wheat	cytosol	31.41	24.82
TraesCS2D01G107200.1	Wheat	nucleus	35.57	24.76
TraesCS1A01G299400.1	Wheat	cytosol	31.41	24.73
GSMUA_Achr8P02810_001	Banana	mitochondrion	30.25	24.72
TraesCS1D01G298300.1	Wheat	nucleus	31.87	24.64
TraesCS2B01G124200.1	Wheat	nucleus	35.57	24.56
CDY07602	Canola	nucleus	26.79	24.47
Zm00001d010610_P001	Maize	cytosol	31.41	24.42
Os05t0476100-01	Rice	cytosol, nucleus, plastid	31.87	24.38
CDY24901	Canola	cytosol	26.56	24.26
HORVU2Hr1G018380.4	Barley	nucleus	35.57	24.02
CDX93176	Canola	cytosol	21.02	23.58
VIT_08s0058g01020.t01	Wine grape	cytosol	44.11	22.71
CDY06986	Canola	cytosol	23.09	22.12
HORVU1Hr1G070120.3	Barley	nucleus	31.18	21.84
CDX72151	Canola	cytosol	21.02	21.56
CDY12396	Canola	cytosol, endoplasmic reticulum, nucleus	15.7	20.18
CDY27228	Canola	cytosol	21.71	19.67
OQU78181	Sorghum	nucleus	31.41	9.87

Protein Annotations

EnsemblPlants:CDY70507	EnsemblPlantsGene:GSBRNA2T00003924001	InterPro:Web	ncoils:Coil	PANTHER:PTHR32054	PANTHER:PTHR32054:SF4
PFAM:PF05701	ProteinID:CDY70507	ProteinID:CDY70507.1	SEG:seg	UniParc:UPI0004EF2AB9	UniProt:A0A078JXX1
MapMan:35.1	:	:	:	:	:

Description

BnaCnng68670DBnaCnng68670D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JXX1]

Coordinates

chrLK042328:+:218..1580

Molecular Weight (calculated)

48606.6 Da

IEP (calculated)

9.975

GRAVY (calculated)

-0.742

Length

433 amino acids

Sequence
(BLAST)

001: MVKECETLDV LKELELTKAR IINLNSKLQQ KKKKNKESLA EEVHCHIKPA GMVLQDLNKA KMNLCKRTVD LAGLRRSVEV LSKQLKEEKD ALEKTRERLM
101: HKSLKVISLE EEEEAKKGET SEKDLENNAL RMINEVRRLS CEAQEYKKTG EKAMAEIKHT REKIKTVEIK LVAARKMKEA ARAAAEAVAI AEIKAVAGSE
201: NTVTISAEEY AKLTLDARDA EEEAWKRVED AMSTVEEANV SEMDTLKRAD EAAQEVEASK RAFEEAVERE NTANATKLEA EEALRNLKSE KGQRRRSSVN
301: NTAKFKTRRE TITNSLMDVN GLHLTYDFVP GPSSSSVPVL KPTMSIGQIL SKKLLVAEDS DMSVVKERSK MSLGQMLAKN SNGDGTLSKK SEGKENEKRS
401: VKRKNLGFAK IVLLLNKESK NNKKNKKIGL NLR

Best Arabidopsis Sequence Match ( AT2G38370.1 )
(BLAST)

001: MAEFPEPGTV NPDSDLSNGR AEKPEIDTSA PFESVREAAT RFGGFGFWRP SLNKLPDASQ ENIQEPDIMG LKAQAFELQR ELIVKERETL EVLKELEATK
101: ATVLKLQQRN EAYEEDTLRE EVDSHIKPAG VVLKDLSQAK MNLCKIASIR ESVEQLKNKL NEERAALEKT RERLMEKSLK VFSLEEEEVR VRFAKEGQTG
201: EKDLGMLNEV QRLSRQAQEV KKTGENAELE VVKAMAETES TRDKIRTAKI RLVAARKMKE AAREAEAVAI AEIEAVTGSM NVGKAEAVTI SAEEYSVLAR
301: SARDAEEEAR KRVEDAMSRV EEANVSKKDV LKKVDEAAQE IETSKRVLEE AVERVDAANA SKIEAEEALR KWRSENGQRR RLSSSVNNTS KFKSRRETTT
401: RLMDVNGLHL TYDVVDGSSS SSTVPVLKPT MSIGQILSKK LLLAEDSDMN VANERRKMSL GQMLAKNSSS DKTVSKRSEG KENEKRTKTR KRKSFGFAKI
501: SVLLNKESKN KKKKKKIALN LR

Arabidopsis Description

Plant protein of unknown function (DUF827) [Source:TAIR;Acc:AT2G38370]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.