CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
EER96335
EES01631
EES05532
EES09201
EES16322
KXG19644
KXG37587
KXG37588
KXG38092
OQU78227
OQU91730

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G56270.1	EER96335	AT2G04630.1	21798944
AT3G56270.1	KXG38092	AT2G04630.1	21798944
AT3G56270.1	EES01631	AT2G41090.1	17360592
AT3G56270.1	EES09201	AT2G41090.1	17360592
AT3G56270.1	EES16322	AT2G41090.1	17360592
AT3G56270.1	OQU78227	AT2G41090.1	17360592
AT3G56270.1	EES01631	AT2G41100.1	17360592
AT3G56270.1	EES09201	AT2G41100.1	17360592
AT3G56270.1	EES16322	AT2G41100.1	17360592
AT3G56270.1	OQU78227	AT2G41100.1	17360592
AT3G56270.1	EES05532	AT3G01180.1	21798944
AT3G56270.1	KXG19644	AT3G01180.1	21798944
AT3G56270.1	OQU91730	AT3G01180.1	21798944
AT3G56270.1	KXG37587	AT4G14640.1	17360592
AT3G56270.1	KXG37588	AT4G14640.1	17360592
AT3G56270.1	EES01631	AT5G21274.1	17360592
AT3G56270.1	EES09201	AT5G21274.1	17360592
AT3G56270.1	EES16322	AT5G21274.1	17360592
AT3G56270.1	OQU78227	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d047516_P001	Maize	nucleus	84.4	84.4
Os03t0339700-01	Rice	nucleus	71.38	71.51
EER97734	Sorghum	nucleus	58.17	54.84
GSMUA_Achr8P21300_001	Banana	nucleus	37.43	47.66
GSMUA_Achr3P09860_001	Banana	nucleus	34.13	44.6
KRH65464	Soybean	nucleus	44.59	43.39
KRH76097	Soybean	nucleus	44.4	43.29
PGSC0003DMT400068339	Potato	nucleus	41.28	39.47
KRH00407	Soybean	nucleus	40.92	38.99
Solyc09g042710.2.1	Tomato	nucleus	40.73	38.74
KRG94824	Soybean	cytosol	33.95	38.7
AT3G51720.1	Thale cress	nucleus	28.07	37.59
KRH40785	Soybean	nucleus	33.58	37.35
CDX78029	Canola	nucleus	27.16	36.1
Bra036780.1-P	Field mustard	nucleus	26.97	35.85
CDX73702	Canola	nucleus	26.97	35.59
CDY70507	Canola	cytosol, nucleus, plastid	28.26	35.57
CDY18389	Canola	nucleus	32.84	35.45
Bra017122.1-P	Field mustard	nucleus	32.48	34.91
AT2G38370.2	Thale cress	nucleus	33.95	34.32
CDX93176	Canola	cytosol	24.04	33.94
CDY65893	Canola	nucleus	30.28	33.27
VIT_13s0067g02400.t01	Wine grape	nucleus	32.48	33.15
Bra000057.1-P	Field mustard	nucleus	29.17	32.58
CDY07733	Canola	cytosol	19.63	31.94
Bra016990.1-P	Field mustard	cytosol	25.69	30.97
CDY06986	Canola	cytosol	25.69	30.97
CDY07266	Canola	cytosol, mitochondrion	9.17	30.86
PGSC0003DMT400074781	Potato	nucleus	28.07	30.72
KRH31225	Soybean	cytosol	31.01	30.18
CDY04348	Canola	nucleus	15.23	30.07
Solyc06g050350.2.1	Tomato	nucleus	28.62	30.06
CDY24901	Canola	cytosol	25.87	29.75
CDY07602	Canola	nucleus	25.69	29.54
Bra000190.1-P	Field mustard	nucleus	25.69	29.54
CDY19552	Canola	mitochondrion	10.83	29.5
KRG97647	Soybean	plastid	30.28	29.46
VIT_08s0058g01020.t01	Wine grape	cytosol	45.14	29.25
KRH73215	Soybean	cytosol	28.81	28.24
KRH14870	Soybean	nucleus	30.09	27.94
AT2G40480.1	Thale cress	cytosol	26.24	27.61
CDY58310	Canola	nucleus	13.21	27.17
CDY11490	Canola	nucleus	13.21	27.17
CDX72151	Canola	cytosol	20.73	26.78
AT3G56270.1	Thale cress	cytosol	21.83	26.68
CDY70964	Canola	cytosol	7.71	24.14
CDY27228	Canola	cytosol	20.55	23.43
Bra007233.1-P	Field mustard	cytosol	20.37	23.22
Bra007760.1-P	Field mustard	nucleus	13.39	22.74
CDY12396	Canola	cytosol, endoplasmic reticulum, nucleus	10.46	16.91
Bra039972.1-P	Field mustard	cytosol	7.71	16.8
OQU78181	Sorghum	nucleus	27.34	10.81

Protein Annotations

MapMan:35.1	EntrezGene:8082326	UniProt:C5X0S0	ncoils:Coil	EnsemblPlants:EER92305	ProteinID:EER92305
ProteinID:EER92305.1	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829
GO:GO:0008150	GO:GO:0009903	GO:GO:0009904	GO:GO:0009987	GO:GO:0016043	PFAM:PF05701
PANTHER:PTHR32054	PANTHER:PTHR32054:SF4	EnsemblPlantsGene:SORBI_3001G379500	UniParc:UPI0001A82A2C	InterPro:Web	RefSeq:XP_002465307.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:+:66791940..66794682

Molecular Weight (calculated)

59804.3 Da

IEP (calculated)

5.035

GRAVY (calculated)

-0.643

Length

545 amino acids

Sequence
(BLAST)

001: MSSDAECAAA QAAAPDAAGG GRAEIDTSAP FESVREAVDR FGGSAAWSSD LVRRMFAPSK KHEHSEQAAE AINAEEQAAQ LENELAVKER ETLDVLKELE
101: ATKKIIADLK LKIQKEATET SPEEAAKSDE ADQVSEAGPE EQQPENINVD VDMEGAEENH SGSVSAELEQ AKASLNRTTG DLAAVRAAVE LLRNSITKEK
201: LLLERGREKL SSNTSLVSSL EDELDQAAQK METLKDLQRR RKDPSDIFME IKKMTTEVQQ LRSMANDSKS EAMVLAAEIE QAKASISTAE VRCIAARKME
301: DAARAAEALA LAEIKALLSS ESSFEGDTAS DGVTLSMEEY FTLCSKALEA DENSRKKAED AMLQVDVANN SESESVKRLE DAKVEVEECK KALQEALKRV
401: EAANHGKLAV EEILRRWKSE SGHKKRYLGG SPKFKNVAHR REYSHTTDMI SDVSNRSHKP TLSIGQILSM KLMGPDGYDK SVWDDKASEI PDISLGQILN
501: RSGVLCREDM ATRKRISGKR KKFALTGLSV LLAKQSKNKK KRESF

Best Arabidopsis Sequence Match ( AT2G38370.1 )
(BLAST)

001: MAEFPEPGTV NPDSDLSNGR AEKPEIDTSA PFESVREAAT RFGGFGFWRP SLNKLPDASQ ENIQEPDIMG LKAQAFELQR ELIVKERETL EVLKELEATK
101: ATVLKLQQRN EAYEEDTLRE EVDSHIKPAG VVLKDLSQAK MNLCKIASIR ESVEQLKNKL NEERAALEKT RERLMEKSLK VFSLEEEEVR VRFAKEGQTG
201: EKDLGMLNEV QRLSRQAQEV KKTGENAELE VVKAMAETES TRDKIRTAKI RLVAARKMKE AAREAEAVAI AEIEAVTGSM NVGKAEAVTI SAEEYSVLAR
301: SARDAEEEAR KRVEDAMSRV EEANVSKKDV LKKVDEAAQE IETSKRVLEE AVERVDAANA SKIEAEEALR KWRSENGQRR RLSSSVNNTS KFKSRRETTT
401: RLMDVNGLHL TYDVVDGSSS SSTVPVLKPT MSIGQILSKK LLLAEDSDMN VANERRKMSL GQMLAKNSSS DKTVSKRSEG KENEKRTKTR KRKSFGFAKI
501: SVLLNKESKN KKKKKKIALN LR

Arabidopsis Description

Plant protein of unknown function (DUF827) [Source:TAIR;Acc:AT2G38370]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.