CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH00407	Soybean	nucleus	84.08	72.03
KRG94824	Soybean	cytosol	68.37	70.08
KRH76097	Soybean	nucleus	64.9	56.89
KRH65464	Soybean	nucleus	63.67	55.71
PGSC0003DMT400068339	Potato	nucleus	53.06	45.61
Solyc09g042710.2.1	Tomato	nucleus	52.65	45.03
CDY70507	Canola	cytosol, nucleus, plastid	38.98	44.11
CDY07733	Canola	cytosol	28.57	41.79
CDY04348	Canola	nucleus	22.24	39.49
CDY07266	Canola	cytosol, mitochondrion	12.86	38.89
AT3G51720.1	Thale cress	nucleus	32.04	38.57
Bra017122.1-P	Field mustard	nucleus	39.18	37.87
CDY18389	Canola	nucleus	37.96	36.83
CDX78029	Canola	nucleus	30.41	36.34
Bra036780.1-P	Field mustard	nucleus	30.41	36.34
CDX73702	Canola	nucleus	30.41	36.08
CDY19552	Canola	mitochondrion	14.49	35.5
CDY65893	Canola	nucleus	35.92	35.48
AT2G38370.2	Thale cress	nucleus	38.98	35.44
Os03t0339700-01	Rice	nucleus	39.18	35.29
Bra000057.1-P	Field mustard	nucleus	35.1	35.25
GSMUA_Achr8P21300_001	Banana	nucleus	30.41	34.81
Os07t0677900-01	Rice	nucleus	36.33	34.3
VIT_08s0058g01020.t01	Wine grape	cytosol	58.16	33.89
EER92305	Sorghum	nucleus	37.35	33.58
Zm00001d047516_P001	Maize	nucleus	36.94	33.21
Zm00001d007164_P001	Maize	nucleus	36.94	32.67
GSMUA_Achr3P09860_001	Banana	nucleus	26.94	31.65
TraesCS2A01G106600.1	Wheat	nucleus	37.55	30.46
EER97734	Sorghum	nucleus	35.71	30.28
CDY11490	Canola	nucleus	16.33	30.19
CDY58310	Canola	nucleus	16.33	30.19
GSMUA_Achr8P02810_001	Banana	mitochondrion	32.24	29.81
TraesCS2D01G107200.1	Wheat	nucleus	37.55	29.58
KRG97647	Soybean	plastid	33.47	29.29
TraesCS1B01G309200.1	Wheat	cytosol	32.65	29.2
TraesCS2B01G124200.1	Wheat	nucleus	37.35	29.19
TraesCS1A01G299400.1	Wheat	cytosol	32.65	29.09
HORVU2Hr1G018380.4	Barley	nucleus	37.76	28.86
CDY70964	Canola	cytosol	10.2	28.74
KRH31225	Soybean	cytosol	32.45	28.39
TraesCS1D01G298300.1	Wheat	nucleus	32.04	28.04
Os05t0476100-01	Rice	cytosol, nucleus, plastid	31.43	27.21
Zm00001d010610_P001	Maize	cytosol	30.2	26.57
HORVU1Hr1G070120.3	Barley	nucleus	32.65	25.89
KRH73215	Soybean	cytosol	28.16	24.82
KRH14870	Soybean	nucleus	29.18	24.36
Bra007760.1-P	Field mustard	nucleus	15.92	24.3
Bra039972.1-P	Field mustard	cytosol	11.22	22.0
CDY12396	Canola	cytosol, endoplasmic reticulum, nucleus	12.04	17.51
OQU78181	Sorghum	nucleus	30.41	10.81

Protein Annotations

MapMan:35.1	UniProt:A0A0R0IEF7	EMBL:ACUP02006055	ncoils:Coil	EnsemblPlantsGene:GLYMA_09G277300	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0008150	GO:GO:0009903
GO:GO:0009904	GO:GO:0009987	GO:GO:0016043	EnsemblPlants:KRH40785	ProteinID:KRH40785	ProteinID:KRH40785.1
PFAM:PF05701	PANTHER:PTHR32054	PANTHER:PTHR32054:SF4	UniParc:UPI0006ED9E76	InterPro:Web	SEG:seg

Description

hypothetical protein

Coordinates

chr9:-:49271153..49276167

Molecular Weight (calculated)

55702.7 Da

IEP (calculated)

9.871

GRAVY (calculated)

-0.774

Length

490 amino acids

Sequence
(BLAST)

001: MSILPAEVKQ GVYNSAALDR DGWNERETLD VLKELESTKR LVEDLKSKIQ KEESEANLNL QMGKCDKKSV VDENEEKENQ VNQLNVLQPS REGFIPYPSS
101: TPGLILMKLK QAKLNLTKTT NDLADVRTSV ESLNKRLEKE RISLKKTCER LAQNTSKISS LEEELNQTRL RLQIAKDAEI KGALDDPLDI TRELQRLSYE
201: AKNFKRMGES AKSKVLRTMS EIEQTKTMLR TTEIRLVAAR KMKEAARAVE AFALAEINVV SNHDSSPGNQ VTLSFEKYTA LTCKARDSEE QSKKRVASAM
301: LEVDETNLSN MDILKRVEEA TEEVKTSKKA LEEALERVEA ANRDKVAVEE ALRNWRSEGQ KRRSSIHNST KFKNCCLSHH WRDPQLLDVN GLHLVNDEAK
401: PVKPTLSIGQ ILSRKLLQPQ KFEAGEGISM KQNVSLGQMF GKQNNDRPID RQVEKETGHK LFSTKSQKFG FARFSHILSK QKKKPTLNLR

Best Arabidopsis Sequence Match ( AT3G51720.1 )
(BLAST)

001: MAETLEPSLV GEIDTSAPFE SVREAATRFG GFGFWKPSSL NISEASQNEV GMVLKASELE KELIEKEGET LKVLKSLEST KAIVEELKSK IQNKEDKENC
101: DMNVFKELNQ AKMNLCKTTK DLAAIRVSVG LLNKRLEEER AALEKTRERL NSENAAEMSM EIQRLSYEAK EFSRTGENVR YAVNKAVAEI EQTRNKIEAA
201: EMRLIAARKM KEAARAAEAV AIAEIKAVTR RGRRRRRGGN GEETMQEEIL ETIDETAREI RSSRRTLEEG LAKMEAEEGN WWWTEQRRRS SCSAKFKNPP
301: YMMDVKGLNM MMNGDGTSSS VAVLKPTMSI GQILSRKLLL ADESAMMMNG RVSLGQILGK TNFGDREKEK RFNGKRKRFG FANLSVMLNK ESKKKNKKKK
401: IALNLSC

Arabidopsis Description

WEB family protein At3g51720 [Source:UniProtKB/Swiss-Prot;Acc:Q9SCT6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.