Factsheet for HORVU1Hr1G070120.3

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
TargetP:	mitochondrion
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU0Hr1G001280.1
HORVU1Hr1G035960.19
HORVU2Hr1G016740.4
HORVU2Hr1G030940.1
HORVU3Hr1G038010.1
HORVU3Hr1G079210.4
HORVU4Hr1G026290.3
HORVU5Hr1G014060.1
HORVU5Hr1G014070.2
HORVU5Hr1G044710.4
HORVU6Hr1G075950.4
HORVU7Hr1G038420.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G56270.1	HORVU2Hr1G030940.1	AT2G04630.1	21798944
AT3G56270.1	HORVU0Hr1G001280.1	AT2G41090.1	17360592
AT3G56270.1	HORVU2Hr1G016740.4	AT2G41090.1	17360592
AT3G56270.1	HORVU3Hr1G038010.1	AT2G41090.1	17360592
AT3G56270.1	HORVU3Hr1G079210.4	AT2G41090.1	17360592
AT3G56270.1	HORVU4Hr1G026290.3	AT2G41090.1	17360592
AT3G56270.1	HORVU5Hr1G014060.1	AT2G41090.1	17360592
AT3G56270.1	HORVU5Hr1G014070.2	AT2G41090.1	17360592
AT3G56270.1	HORVU5Hr1G044710.4	AT2G41090.1	17360592
AT3G56270.1	HORVU0Hr1G001280.1	AT2G41100.1	17360592
AT3G56270.1	HORVU2Hr1G016740.4	AT2G41100.1	17360592
AT3G56270.1	HORVU3Hr1G038010.1	AT2G41100.1	17360592
AT3G56270.1	HORVU3Hr1G079210.4	AT2G41100.1	17360592
AT3G56270.1	HORVU4Hr1G026290.3	AT2G41100.1	17360592
AT3G56270.1	HORVU5Hr1G014060.1	AT2G41100.1	17360592
AT3G56270.1	HORVU5Hr1G014070.2	AT2G41100.1	17360592
AT3G56270.1	HORVU5Hr1G044710.4	AT2G41100.1	17360592
AT3G56270.1	HORVU1Hr1G035960.19	AT3G01180.1	21798944
AT3G56270.1	HORVU6Hr1G075950.4	AT3G01180.1	21798944
AT3G56270.1	HORVU7Hr1G038420.1	AT3G01180.1	21798944
AT3G56270.1	HORVU0Hr1G001280.1	AT5G21274.1	17360592
AT3G56270.1	HORVU2Hr1G016740.4	AT5G21274.1	17360592
AT3G56270.1	HORVU3Hr1G038010.1	AT5G21274.1	17360592
AT3G56270.1	HORVU3Hr1G079210.4	AT5G21274.1	17360592
AT3G56270.1	HORVU4Hr1G026290.3	AT5G21274.1	17360592
AT3G56270.1	HORVU5Hr1G014060.1	AT5G21274.1	17360592
AT3G56270.1	HORVU5Hr1G014070.2	AT5G21274.1	17360592
AT3G56270.1	HORVU5Hr1G044710.4	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G309200.1	Wheat	cytosol	76.54	86.31
TraesCS1A01G299400.1	Wheat	cytosol	75.4	84.73
TraesCS1D01G298300.1	Wheat	nucleus	75.57	83.39
Os05t0476100-01	Rice	cytosol, nucleus, plastid	59.55	65.02
Zm00001d010610_P001	Maize	cytosol	56.63	62.84
GSMUA_Achr8P02810_001	Banana	mitochondrion	31.88	37.17
KRH76097	Soybean	nucleus	31.23	34.53
KRG94824	Soybean	cytosol	26.21	33.89
KRH65464	Soybean	nucleus	30.58	33.75
KRH00407	Soybean	nucleus	30.26	32.69
KRH40785	Soybean	nucleus	25.89	32.65
PGSC0003DMT400068339	Potato	nucleus	29.13	31.58
CDY18389	Canola	nucleus	25.57	31.29
Solyc09g042710.2.1	Tomato	nucleus	28.96	31.24
CDY70507	Canola	cytosol, nucleus, plastid	21.84	31.18
AT3G51720.1	Thale cress	nucleus	20.39	30.96
CDY65893	Canola	nucleus	24.76	30.85
AT2G38370.2	Thale cress	nucleus	26.86	30.8
Bra017122.1-P	Field mustard	nucleus	25.24	30.77
CDX78029	Canola	nucleus	20.06	30.24
CDX73702	Canola	nucleus	20.06	30.02
Bra036780.1-P	Field mustard	nucleus	19.74	29.76
CDY07266	Canola	cytosol, mitochondrion	7.77	29.63
CDY07733	Canola	cytosol	15.86	29.25
CDY19552	Canola	mitochondrion	9.39	29.0
CDY04348	Canola	nucleus	12.95	28.99
Bra000057.1-P	Field mustard	nucleus	22.49	28.48
VIT_13s0067g02400.t01	Wine grape	nucleus	24.6	28.46
Solyc06g050350.2.1	Tomato	nucleus	22.33	26.59
PGSC0003DMT400074781	Potato	nucleus	21.2	26.31
HORVU2Hr1G018380.4	Barley	nucleus	27.02	26.05
CDY58310	Canola	nucleus	11.0	25.66
CDY11490	Canola	nucleus	11.0	25.66
KRH31225	Soybean	cytosol	23.14	25.54
Bra000190.1-P	Field mustard	nucleus	19.09	24.89
CDY07602	Canola	nucleus	19.09	24.89
KRG97647	Soybean	plastid	22.33	24.64
CDY24901	Canola	cytosol	18.61	24.26
VIT_08s0058g01020.t01	Wine grape	cytosol	32.52	23.9
CDX93176	Canola	cytosol	14.89	23.83
AT2G40480.1	Thale cress	cytosol	19.58	23.36
CDY70964	Canola	cytosol	6.47	22.99
KRH73215	Soybean	cytosol	20.55	22.84
CDY06986	Canola	cytosol	16.5	22.57
Bra016990.1-P	Field mustard	cytosol	16.5	22.57
OQU78181	Sorghum	nucleus	49.51	22.21
KRH14870	Soybean	nucleus	21.04	22.15
Bra007760.1-P	Field mustard	nucleus	11.16	21.5
CDX72151	Canola	cytosol	14.56	21.33
AT3G56270.1	Thale cress	cytosol	15.21	21.08
Bra039972.1-P	Field mustard	cytosol	7.44	18.4
CDY27228	Canola	cytosol	13.92	17.99
Bra007233.1-P	Field mustard	cytosol	13.75	17.78
CDY12396	Canola	cytosol, endoplasmic reticulum, nucleus	9.39	17.21

Protein Annotations

EnsemblPlants:HORVU1Hr1G070120.3	EnsemblPlantsGene:HORVU1Hr1G070120	InterPro:Web	ncoils:Coil	PANTHER:PTHR32054	PANTHER:PTHR32054:SF14
PFAM:PF05701	SEG:seg	UniParc:UPI000B46200E	UniProt:A0A287G427	MapMan:35.1	:

Description

No Description!

Coordinates

chrchr1H:-:488308939..488312131

Molecular Weight (calculated)

68492.3 Da

IEP (calculated)

10.092

GRAVY (calculated)

-0.639

Length

618 amino acids

Sequence
(BLAST)

001: GKERKGLPKT RGRRVGSPFT GGPHSGHTPT PTPLHHRPSY HPRLHRAPRT PMAEVVLVAQ HQHAAAGGGD ALALAAMRGR GEVDTSSQFE SVRQAVGRFG
101: GGSVSPWRHP QPPPSPPPLQ LRPEEVELMK VEEQTVKVEM GLFVKESETF KVLKELESTK QVIDDLKLQI EKVTSECGNA AKCHADTMNI HPPPDIEGKL
201: DGHTEPLIQS INTVQSPFTT LMKLNQAKAF LNMDTVKMFK CQIEEEKASL EKTRERLQLN MEKASALEAE LSKTVAQLQV AKDPKPVLEP YDIWLQMKQL
301: NAEKDKHRKM VEDSRLEIGE LTSTIEHTRS KAKTLQFRIV MAEKLKEASR TGEAFALAEM GKRGNMEDPE SATSDVTLSV EEHSKLVREA EESEVASRNR
401: IGAAMQELDQ ANEGKLELLE RVDEAMAAFE TSRKVLEEAL KREEAANKAK VAAEDALRRL RSDQIILNWR PTGNSNSNSS NAVKFKASAT PTIPRKSGTG
501: IYDVNGLSLV ATTPKSTKAM SIGQILSMKL DCEFETAATG KKTAGAATKK KKVSLGQMLS QKYDMYSPMR IDHDGASRKQ FQPRRRRLGF VVYALLLARQ
601: KHRKRQQARA SSCSAKVV

Best Arabidopsis Sequence Match ( AT2G38370.1 )
(BLAST)

001: MAEFPEPGTV NPDSDLSNGR AEKPEIDTSA PFESVREAAT RFGGFGFWRP SLNKLPDASQ ENIQEPDIMG LKAQAFELQR ELIVKERETL EVLKELEATK
101: ATVLKLQQRN EAYEEDTLRE EVDSHIKPAG VVLKDLSQAK MNLCKIASIR ESVEQLKNKL NEERAALEKT RERLMEKSLK VFSLEEEEVR VRFAKEGQTG
201: EKDLGMLNEV QRLSRQAQEV KKTGENAELE VVKAMAETES TRDKIRTAKI RLVAARKMKE AAREAEAVAI AEIEAVTGSM NVGKAEAVTI SAEEYSVLAR
301: SARDAEEEAR KRVEDAMSRV EEANVSKKDV LKKVDEAAQE IETSKRVLEE AVERVDAANA SKIEAEEALR KWRSENGQRR RLSSSVNNTS KFKSRRETTT
401: RLMDVNGLHL TYDVVDGSSS SSTVPVLKPT MSIGQILSKK LLLAEDSDMN VANERRKMSL GQMLAKNSSS DKTVSKRSEG KENEKRTKTR KRKSFGFAKI
501: SVLLNKESKN KKKKKKIALN LR

Arabidopsis Description

Plant protein of unknown function (DUF827) [Source:TAIR;Acc:AT2G38370]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.