CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH40785	Soybean	nucleus	70.08	68.37
KRH00407	Soybean	nucleus	80.54	67.31
KRH76097	Soybean	nucleus	62.13	53.13
KRH65464	Soybean	nucleus	61.3	52.32
Solyc09g042710.2.1	Tomato	nucleus	53.97	45.03
PGSC0003DMT400068339	Potato	nucleus	53.56	44.91
AT3G51720.1	Thale cress	nucleus	33.05	38.82
CDY07733	Canola	cytosol	26.36	37.61
CDY70507	Canola	cytosol, nucleus, plastid	33.89	37.41
CDY07266	Canola	cytosol, mitochondrion	12.55	37.04
CDX78029	Canola	nucleus	31.17	36.34
Bra036780.1-P	Field mustard	nucleus	31.17	36.34
CDX73702	Canola	nucleus	31.38	36.32
CDY04348	Canola	nucleus	20.92	36.23
GSMUA_Achr3P09860_001	Banana	nucleus	31.59	36.21
AT2G38370.2	Thale cress	nucleus	40.59	35.99
Bra000057.1-P	Field mustard	nucleus	36.4	35.66
CDY65893	Canola	nucleus	36.82	35.48
Os03t0339700-01	Rice	nucleus	40.38	35.48
GSMUA_Achr8P21300_001	Banana	nucleus	31.59	35.28
CDY18389	Canola	nucleus	36.61	34.65
Bra017122.1-P	Field mustard	nucleus	36.61	34.52
EER92305	Sorghum	nucleus	38.7	33.95
Zm00001d047516_P001	Maize	nucleus	38.28	33.58
CDY19552	Canola	mitochondrion	14.02	33.5
Os07t0677900-01	Rice	nucleus	35.98	33.14
VIT_08s0058g01020.t01	Wine grape	cytosol	58.16	33.06
Zm00001d007164_P001	Maize	nucleus	37.87	32.67
EER97734	Sorghum	nucleus	38.49	31.83
CDY11490	Canola	nucleus	17.57	31.7
CDY58310	Canola	nucleus	17.57	31.7
GSMUA_Achr8P02810_001	Banana	mitochondrion	34.52	31.13
TraesCS2A01G106600.1	Wheat	nucleus	39.33	31.13
KRG97647	Soybean	plastid	35.77	30.54
KRH31225	Soybean	cytosol	35.36	30.18
TraesCS2D01G107200.1	Wheat	nucleus	38.7	29.74
TraesCS2B01G124200.1	Wheat	nucleus	38.91	29.67
HORVU2Hr1G018380.4	Barley	nucleus	39.75	29.64
TraesCS1B01G309200.1	Wheat	cytosol	33.68	29.38
TraesCS1A01G299400.1	Wheat	cytosol	33.68	29.27
Os05t0476100-01	Rice	cytosol, nucleus, plastid	34.52	29.15
TraesCS1D01G298300.1	Wheat	nucleus	33.68	28.75
CDY70964	Canola	cytosol	10.25	28.16
Zm00001d010610_P001	Maize	cytosol	32.22	27.65
KRH73215	Soybean	cytosol	30.96	26.62
KRH14870	Soybean	nucleus	32.43	26.41
HORVU1Hr1G070120.3	Barley	nucleus	33.89	26.21
Bra007760.1-P	Field mustard	nucleus	17.36	25.86
Bra039972.1-P	Field mustard	cytosol	10.88	20.8
CDY12396	Canola	cytosol, endoplasmic reticulum, nucleus	11.92	16.91
OQU78181	Sorghum	nucleus	29.08	10.09

Protein Annotations

MapMan:35.1	UniProt:A0A0R0EWC8	EMBL:ACUP02012039	ncoils:Coil	EnsemblPlantsGene:GLYMA_19G111700	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0008150	GO:GO:0009903
GO:GO:0009904	GO:GO:0009987	GO:GO:0016043	EnsemblPlants:KRG94824	ProteinID:KRG94824	ProteinID:KRG94824.1
PFAM:PF05701	PANTHER:PTHR32054	PANTHER:PTHR32054:SF4	UniParc:UPI0006EDD9AA	InterPro:Web	SEG:seg

Description

hypothetical protein

Coordinates

chr19:-:36589356..36592546

Molecular Weight (calculated)

54226.4 Da

IEP (calculated)

5.532

GRAVY (calculated)

-0.758

Length

478 amino acids

Sequence
(BLAST)

001: MEAADVVETT TNQSERDSEK KCLRTEIDTS APFESVKEAV TMFGVDIRNP FTHHAEELGA EKLEEQAMLL EKELILKERE TLDVLKELES TKRWENVMKK
101: SVVDENEEKE NQVNQLNVLQ PSGEGFIPYP SSTPGLILMK LKQAKLNLTK TTNDLADRLE KERISLEKTQ LNQTRLRLQI EKDAEIKGAP DDPSDITREL
201: QRLSSEAENF KRMGESAKSE VLRTMSEIEQ TKTMIRIAEI RLVVARKMKE AARATEAFAL AEINVLSNHD SSPGNQVTLS FEEYTALTGK ARDAEEQSKK
301: RVASSMLEVD ETSLSNMDIL KRVEEATEEV KTSKKALEEA LEGVEAANRD KVAVEEALRN WRSEGQKRRS SIHNSTKFKN CCLSHHWRDP RLLDVNGLHL
401: VNDEAKPVKP TLSIGQILSR KLLQPQEFEA GEGISMKQNV PLGQMLDKQN NDRPVDRQVE KETGHKLFST KRKKFGFA

Best Arabidopsis Sequence Match ( AT2G38370.2 )
(BLAST)

001: MVVKTGFPIT DSSSSASMAE FPEPGTVNPD SDLSNGRAEK PEIDTSAPFE SVREAATRFG GFGFWRPSLN KLPDASQENI QEPDIMGLKA QAFELQRELI
101: VKERETLEVL KELEATKATV LKLQQRNEAY EEDTLREEVD SHIKPAGVVL KDLSQAKMNL CKIASIRESV EQLKNKLNEE RAALEKTRER LMEKSLKVFS
201: LEEEEVRVRF AKEGQTGEKD LGMLNEVQRL SRQAQEVKKT GENAELEVVK AMAETESTRD KIRTAKIRLV AARKMKEAAR EAEAVAIAEI EAVTGSMNVG
301: KAEAVTISAE EYSVLARSAR DAEEEARKRV EDAMSRVEEA NVSKKDVLKK VDEAAQEIET SKRVLEEAVE RVDAANASKI EAEEALRKWR SENGQRRRLS
401: SSVNNTSKFK SRRETTTRLM DVNGLHLTYD VVDGSSSSST VPVLKPTMSI GQILSKKLLL AEDSDMNVAN ERRKMSLGQM LAKNSSSDKT VSKRSEGKEN
501: EKRTKTRKRK SFGFAKISVL LNKESKNKKK KKKIALNLR

Arabidopsis Description

Plant protein of unknown function (DUF827) [Source:TAIR;Acc:AT2G38370]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.