Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra000057.1-P | Field mustard | nucleus | 83.58 | 57.38 |
| CDY65893 | Canola | nucleus | 82.69 | 55.85 |
| CDY70507 | Canola | cytosol, nucleus, plastid | 65.67 | 50.81 |
| CDY04348 | Canola | nucleus | 35.82 | 43.48 |
| AT2G38370.2 | Thale cress | nucleus | 68.66 | 42.67 |
| CDY07266 | Canola | cytosol, mitochondrion | 20.6 | 42.59 |
| CDY18389 | Canola | nucleus | 63.88 | 42.38 |
| CDX73702 | Canola | nucleus | 43.28 | 35.11 |
| CDX78029 | Canola | nucleus | 42.39 | 34.63 |
| CDY58310 | Canola | nucleus | 24.18 | 30.57 |
| CDY11490 | Canola | nucleus | 24.18 | 30.57 |
| KRH40785 | Soybean | nucleus | 41.79 | 28.57 |
| KRH76097 | Soybean | nucleus | 45.37 | 27.19 |
| CDY19552 | Canola | mitochondrion | 15.82 | 26.5 |
| KRH65464 | Soybean | nucleus | 44.18 | 26.43 |
| KRG94824 | Soybean | cytosol | 37.61 | 26.36 |
| PGSC0003DMT400068339 | Potato | nucleus | 44.78 | 26.32 |
| Solyc09g042710.2.1 | Tomato | nucleus | 44.48 | 26.0 |
| CDY70964 | Canola | cytosol | 13.43 | 25.86 |
| KRH00407 | Soybean | nucleus | 43.28 | 25.35 |
| GSMUA_Achr3P09860_001 | Banana | nucleus | 29.25 | 23.5 |
| GSMUA_Achr8P21300_001 | Banana | nucleus | 28.66 | 22.43 |
| Os03t0339700-01 | Rice | nucleus | 34.33 | 21.14 |
| Os07t0677900-01 | Rice | nucleus | 31.34 | 20.23 |
| Zm00001d007164_P001 | Maize | nucleus | 33.43 | 20.22 |
| EER97734 | Sorghum | nucleus | 34.33 | 19.9 |
| CDY07602 | Canola | nucleus | 28.06 | 19.83 |
| Zm00001d047516_P001 | Maize | nucleus | 31.94 | 19.63 |
| EER92305 | Sorghum | nucleus | 31.94 | 19.63 |
| CDY24901 | Canola | cytosol | 27.16 | 19.2 |
| CDX93176 | Canola | cytosol | 21.79 | 18.91 |
| TraesCS2A01G106600.1 | Wheat | nucleus | 34.03 | 18.87 |
| CDY06986 | Canola | cytosol | 24.78 | 18.36 |
| TraesCS2B01G124200.1 | Wheat | nucleus | 34.33 | 18.34 |
| GSMUA_Achr8P02810_001 | Banana | mitochondrion | 28.66 | 18.11 |
| CDY12396 | Canola | cytosol, endoplasmic reticulum, nucleus | 18.21 | 18.1 |
| TraesCS2D01G107200.1 | Wheat | nucleus | 33.43 | 18.01 |
| HORVU2Hr1G018380.4 | Barley | nucleus | 34.33 | 17.94 |
| TraesCS1B01G309200.1 | Wheat | cytosol | 28.36 | 17.34 |
| VIT_08s0058g01020.t01 | Wine grape | cytosol | 43.28 | 17.24 |
| Os05t0476100-01 | Rice | cytosol, nucleus, plastid | 28.66 | 16.96 |
| TraesCS1A01G299400.1 | Wheat | cytosol | 27.76 | 16.91 |
| Zm00001d010610_P001 | Maize | cytosol | 28.06 | 16.88 |
| TraesCS1D01G298300.1 | Wheat | nucleus | 28.06 | 16.79 |
| CDX72151 | Canola | cytosol | 20.9 | 16.59 |
| HORVU1Hr1G070120.3 | Barley | nucleus | 29.25 | 15.86 |
| CDY27228 | Canola | cytosol | 21.19 | 14.85 |
| OQU78181 | Sorghum | nucleus | 28.96 | 7.04 |
Protein Annotations
| EnsemblPlants:CDY07733 | EnsemblPlantsGene:GSBRNA2T00124854001 | ncoils:Coil | PANTHER:PTHR32054 | PANTHER:PTHR32054:SF4 | ProteinID:CDY07733 |
| ProteinID:CDY07733.1 | SEG:seg | UniParc:UPI0004EDC6A2 | UniProt:A0A078F7Q3 | MapMan:35.1 | : |
Description
BnaA03g17780DBnaA03g17780D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F7Q3]
Coordinates
chrLK031980:+:645981..647821
Molecular Weight (calculated)
37268.1 Da
IEP (calculated)
10.571
GRAVY (calculated)
-0.707
Length
335 amino acids
Sequence
(BLAST)
(BLAST)
001: MNLCKRTVDL AGIRGSVEVL NKKLQEEKAA LEKTRERLMK RSLKGETGEM DAFGMMNEVQ RVSSEAQELK RTGESARVEI VKAMAEIEDT REKIKTAKIR
101: LVAARKMKEA ARAAEAVAVA EIKAVTGSQK TDEADAMSRV EANVLKKVDE TAQEVETSKK AMEEAVEMVD TANATKLEGE ETLRNRQLEK GQRRRLSSSV
201: NNTAKFKSRR ETTTTTPRTT RLMDVNGLHL TYDDVAVGSS SSVPVLKATM SIGQILSKKL LVAEDSDAMN VASERKKMSL GQMLAKNSND DETWSKKSEG
301: KENGKRSLTR KRFAKIAMLL KKESKNKKKI ALKLR
101: LVAARKMKEA ARAAEAVAVA EIKAVTGSQK TDEADAMSRV EANVLKKVDE TAQEVETSKK AMEEAVEMVD TANATKLEGE ETLRNRQLEK GQRRRLSSSV
201: NNTAKFKSRR ETTTTTPRTT RLMDVNGLHL TYDDVAVGSS SSVPVLKATM SIGQILSKKL LVAEDSDAMN VASERKKMSL GQMLAKNSND DETWSKKSEG
301: KENGKRSLTR KRFAKIAMLL KKESKNKKKI ALKLR
001: MAEFPEPGTV NPDSDLSNGR AEKPEIDTSA PFESVREAAT RFGGFGFWRP SLNKLPDASQ ENIQEPDIMG LKAQAFELQR ELIVKERETL EVLKELEATK
101: ATVLKLQQRN EAYEEDTLRE EVDSHIKPAG VVLKDLSQAK MNLCKIASIR ESVEQLKNKL NEERAALEKT RERLMEKSLK VFSLEEEEVR VRFAKEGQTG
201: EKDLGMLNEV QRLSRQAQEV KKTGENAELE VVKAMAETES TRDKIRTAKI RLVAARKMKE AAREAEAVAI AEIEAVTGSM NVGKAEAVTI SAEEYSVLAR
301: SARDAEEEAR KRVEDAMSRV EEANVSKKDV LKKVDEAAQE IETSKRVLEE AVERVDAANA SKIEAEEALR KWRSENGQRR RLSSSVNNTS KFKSRRETTT
401: RLMDVNGLHL TYDVVDGSSS SSTVPVLKPT MSIGQILSKK LLLAEDSDMN VANERRKMSL GQMLAKNSSS DKTVSKRSEG KENEKRTKTR KRKSFGFAKI
501: SVLLNKESKN KKKKKKIALN LR
101: ATVLKLQQRN EAYEEDTLRE EVDSHIKPAG VVLKDLSQAK MNLCKIASIR ESVEQLKNKL NEERAALEKT RERLMEKSLK VFSLEEEEVR VRFAKEGQTG
201: EKDLGMLNEV QRLSRQAQEV KKTGENAELE VVKAMAETES TRDKIRTAKI RLVAARKMKE AAREAEAVAI AEIEAVTGSM NVGKAEAVTI SAEEYSVLAR
301: SARDAEEEAR KRVEDAMSRV EEANVSKKDV LKKVDEAAQE IETSKRVLEE AVERVDAANA SKIEAEEALR KWRSENGQRR RLSSSVNNTS KFKSRRETTT
401: RLMDVNGLHL TYDVVDGSSS SSTVPVLKPT MSIGQILSKK LLLAEDSDMN VANERRKMSL GQMLAKNSSS DKTVSKRSEG KENEKRTKTR KRKSFGFAKI
501: SVLLNKESKN KKKKKKIALN LR
Arabidopsis Description
Plant protein of unknown function (DUF827) [Source:TAIR;Acc:AT2G38370]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.