Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY07733 | Canola | cytosol | 42.67 | 68.66 |
| CDY65893 | Canola | nucleus | 59.55 | 64.72 |
| CDY70507 | Canola | cytosol, nucleus, plastid | 51.58 | 64.2 |
| Bra000057.1-P | Field mustard | nucleus | 56.96 | 62.91 |
| CDY18389 | Canola | nucleus | 58.07 | 61.98 |
| Bra017122.1-P | Field mustard | nucleus | 56.77 | 60.35 |
| AT3G51720.1 | Thale cress | nucleus | 39.52 | 52.33 |
| KRH76097 | Soybean | nucleus | 45.64 | 44.01 |
| KRH65464 | Soybean | nucleus | 44.34 | 42.68 |
| PGSC0003DMT400068339 | Potato | nucleus | 44.9 | 42.46 |
| Solyc09g042710.2.1 | Tomato | nucleus | 44.53 | 41.88 |
| KRG94824 | Soybean | cytosol | 35.99 | 40.59 |
| KRH00407 | Soybean | nucleus | 41.56 | 39.16 |
| KRH40785 | Soybean | nucleus | 35.44 | 38.98 |
| Os03t0339700-01 | Rice | nucleus | 35.99 | 35.66 |
| GSMUA_Achr8P21300_001 | Banana | nucleus | 27.83 | 35.05 |
| GSMUA_Achr3P09860_001 | Banana | nucleus | 26.9 | 34.77 |
| EER92305 | Sorghum | nucleus | 34.32 | 33.95 |
| Zm00001d047516_P001 | Maize | nucleus | 33.95 | 33.58 |
| Zm00001d007164_P001 | Maize | nucleus | 34.51 | 33.57 |
| Os07t0677900-01 | Rice | nucleus | 32.28 | 33.53 |
| EER97734 | Sorghum | nucleus | 34.32 | 32.01 |
| TraesCS2A01G106600.1 | Wheat | nucleus | 33.77 | 30.13 |
| AT2G40480.1 | Thale cress | cytosol | 28.76 | 29.92 |
| TraesCS1B01G309200.1 | Wheat | cytosol | 30.06 | 29.56 |
| GSMUA_Achr8P02810_001 | Banana | mitochondrion | 28.94 | 29.43 |
| TraesCS1D01G298300.1 | Wheat | nucleus | 30.24 | 29.11 |
| TraesCS1A01G299400.1 | Wheat | cytosol | 29.68 | 29.09 |
| TraesCS2B01G124200.1 | Wheat | nucleus | 33.77 | 29.03 |
| Zm00001d010610_P001 | Maize | cytosol | 29.87 | 28.9 |
| HORVU2Hr1G018380.4 | Barley | nucleus | 34.32 | 28.86 |
| TraesCS2D01G107200.1 | Wheat | nucleus | 33.21 | 28.78 |
| Os05t0476100-01 | Rice | cytosol, nucleus, plastid | 30.06 | 28.62 |
| VIT_08s0058g01020.t01 | Wine grape | cytosol | 44.16 | 28.3 |
| AT3G56270.1 | Thale cress | cytosol | 22.82 | 27.58 |
| HORVU1Hr1G070120.3 | Barley | nucleus | 30.8 | 26.86 |
| OQU78181 | Sorghum | nucleus | 25.23 | 9.87 |
Protein Annotations
| MapMan:35.1 | EntrezGene:818418 | UniProt:A0A1P8AX38 | ProteinID:AAC28767.1 | ProteinID:AEC09529.1 | EMBL:AK229708 |
| ProteinID:ANM61224.1 | ArrayExpress:AT2G38370 | EnsemblPlantsGene:AT2G38370 | RefSeq:AT2G38370 | TAIR:AT2G38370 | RefSeq:AT2G38370-TAIR-G |
| EnsemblPlants:AT2G38370.2 | EMBL:BT008635 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005829 | GO:GO:0008150 | GO:GO:0009903 | GO:GO:0009904 |
| GO:GO:0009987 | GO:GO:0016043 | RefSeq:NP_001323454.1 | RefSeq:NP_181371.2 | PFAM:PF05701 | PANTHER:PTHR32054 |
| PANTHER:PTHR32054:SF4 | UniParc:UPI00000AA281 | InterPro:Web | SEG:seg | : | : |
Description
Plant protein of unknown function (DUF827) [Source:TAIR;Acc:AT2G38370]
Coordinates
chr2:-:16071979..16074917
Molecular Weight (calculated)
60325.9 Da
IEP (calculated)
9.780
GRAVY (calculated)
-0.731
Length
539 amino acids
Sequence
(BLAST)
(BLAST)
001: MVVKTGFPIT DSSSSASMAE FPEPGTVNPD SDLSNGRAEK PEIDTSAPFE SVREAATRFG GFGFWRPSLN KLPDASQENI QEPDIMGLKA QAFELQRELI
101: VKERETLEVL KELEATKATV LKLQQRNEAY EEDTLREEVD SHIKPAGVVL KDLSQAKMNL CKIASIRESV EQLKNKLNEE RAALEKTRER LMEKSLKVFS
201: LEEEEVRVRF AKEGQTGEKD LGMLNEVQRL SRQAQEVKKT GENAELEVVK AMAETESTRD KIRTAKIRLV AARKMKEAAR EAEAVAIAEI EAVTGSMNVG
301: KAEAVTISAE EYSVLARSAR DAEEEARKRV EDAMSRVEEA NVSKKDVLKK VDEAAQEIET SKRVLEEAVE RVDAANASKI EAEEALRKWR SENGQRRRLS
401: SSVNNTSKFK SRRETTTRLM DVNGLHLTYD VVDGSSSSST VPVLKPTMSI GQILSKKLLL AEDSDMNVAN ERRKMSLGQM LAKNSSSDKT VSKRSEGKEN
501: EKRTKTRKRK SFGFAKISVL LNKESKNKKK KKKIALNLR
101: VKERETLEVL KELEATKATV LKLQQRNEAY EEDTLREEVD SHIKPAGVVL KDLSQAKMNL CKIASIRESV EQLKNKLNEE RAALEKTRER LMEKSLKVFS
201: LEEEEVRVRF AKEGQTGEKD LGMLNEVQRL SRQAQEVKKT GENAELEVVK AMAETESTRD KIRTAKIRLV AARKMKEAAR EAEAVAIAEI EAVTGSMNVG
301: KAEAVTISAE EYSVLARSAR DAEEEARKRV EDAMSRVEEA NVSKKDVLKK VDEAAQEIET SKRVLEEAVE RVDAANASKI EAEEALRKWR SENGQRRRLS
401: SSVNNTSKFK SRRETTTRLM DVNGLHLTYD VVDGSSSSST VPVLKPTMSI GQILSKKLLL AEDSDMNVAN ERRKMSLGQM LAKNSSSDKT VSKRSEGKEN
501: EKRTKTRKRK SFGFAKISVL LNKESKNKKK KKKIALNLR
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.