Factsheet for VIT_08s0058g01020.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH76097	Soybean	nucleus	41.14	61.9
KRH65464	Soybean	nucleus	40.67	61.07
PGSC0003DMT400068339	Potato	nucleus	39.71	58.6
KRH40785	Soybean	nucleus	33.89	58.16
KRG94824	Soybean	cytosol	33.06	58.16
KRH00407	Soybean	nucleus	39.48	58.04
Solyc09g042710.2.1	Tomato	nucleus	39.24	57.59
GSMUA_Achr3P09860_001	Banana	nucleus	24.49	49.4
GSMUA_Achr8P21300_001	Banana	nucleus	25.09	49.3
AT3G51720.1	Thale cress	nucleus	23.07	47.67
CDY19552	Canola	mitochondrion	11.06	46.5
Os03t0339700-01	Rice	nucleus	29.73	45.96
CDX78029	Canola	nucleus	22.35	45.85
Bra036780.1-P	Field mustard	nucleus	22.24	45.61
CDX73702	Canola	nucleus	22.35	45.52
EER92305	Sorghum	nucleus	29.25	45.14
VIT_13s0067g02400.t01	Wine grape	nucleus	28.66	45.13
Zm00001d047516_P001	Maize	nucleus	28.78	44.4
CDY04348	Canola	nucleus	14.51	44.2
AT2G38370.2	Thale cress	nucleus	28.3	44.16
CDY70507	Canola	cytosol, nucleus, plastid	22.71	44.11
Os07t0677900-01	Rice	nucleus	27.11	43.93
CDY07733	Canola	cytosol	17.24	43.28
CDY07266	Canola	cytosol, mitochondrion	8.32	43.21
Zm00001d007164_P001	Maize	nucleus	28.3	42.96
CDY65893	Canola	nucleus	25.21	42.74
CDY18389	Canola	nucleus	25.45	42.38
Bra000057.1-P	Field mustard	nucleus	24.49	42.21
Bra017122.1-P	Field mustard	nucleus	25.33	42.01
EER97734	Sorghum	nucleus	28.3	41.18
GSMUA_Achr8P02810_001	Banana	mitochondrion	25.92	41.13
TraesCS2A01G106600.1	Wheat	nucleus	29.49	41.06
TraesCS2B01G124200.1	Wheat	nucleus	29.25	39.23
TraesCS2D01G107200.1	Wheat	nucleus	29.01	39.23
HORVU2Hr1G018380.4	Barley	nucleus	29.25	38.38
Os05t0476100-01	Rice	cytosol, nucleus, plastid	24.97	37.1
TraesCS1B01G309200.1	Wheat	cytosol	23.78	36.5
TraesCS1A01G299400.1	Wheat	cytosol	23.31	35.64
TraesCS1D01G298300.1	Wheat	nucleus	23.66	35.54
Zm00001d010610_P001	Maize	cytosol	23.07	34.83
CDY11490	Canola	nucleus	10.58	33.58
CDY58310	Canola	nucleus	10.58	33.58
CDY70964	Canola	cytosol	6.9	33.33
HORVU1Hr1G070120.3	Barley	nucleus	23.9	32.52
Bra007760.1-P	Field mustard	nucleus	10.7	28.04
Bra039972.1-P	Field mustard	cytosol	7.37	24.8
CDY12396	Canola	cytosol, endoplasmic reticulum, nucleus	8.32	20.77
OQU78181	Sorghum	nucleus	21.17	12.92

Protein Annotations

Gene3D:1.10.225.10	EntrezGene:100248250	wikigene:100248250	EntrezGene:100265320	wikigene:100265320	MapMan:35.1
EMBL:AM461662	ProteinID:CAN81220	ProteinID:CAN81220.1	ProteinID:CCB44785	ProteinID:CCB44785.1	ncoils:Coil
UniProt:F6GXY4	EMBL:FN594967	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005829	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0009903	GO:GO:0009904
GO:GO:0009987	GO:GO:0016043	InterPro:IPR008139	EntrezGene:LOC100248250	wikigene:LOC100248250	EntrezGene:LOC100265320
wikigene:LOC100265320	PFAM:PF03489	PFAM:PF05184	PFAM:PF05701	PFscan:PS50015	PANTHER:PTHR32054
PANTHER:PTHR32054:SF4	SMART:SM00741	SUPFAM:SSF47862	InterPro:SapB_1	InterPro:SapB_2	InterPro:Saposin-like
InterPro:SaposinB_dom	UniParc:UPI000210A317	ArrayExpress:VIT_08s0058g01020	EnsemblPlantsGene:VIT_08s0058g01020	EnsemblPlants:VIT_08s0058g01020.t01	InterPro:Web
RefSeq:XP_002266471	RefSeq:XP_002266471.1	RefSeq:XP_002268581	RefSeq:XP_002268581.1	SEG:seg	:

Description

No Description!

Coordinates

chr8:+:10357383..10373122

Molecular Weight (calculated)

93044.2 Da

IEP (calculated)

6.142

GRAVY (calculated)

-0.334

Length

841 amino acids

Sequence
(BLAST)

001: MAETLKFGTG VEVGNNGVVD SGVKMGNPKG RSEAGSEEWK KEGGGRGEID TSAPFESVKE AASRFGGIGF WKPSHCKLSE AERGIEEVDI AQVEEHAAQL
101: EKDLILKERE TLDVLKELEA TKMIVEELKL KLQKESSEVT AILETNSDDR IVTPIVQEAE MKRHENPEAD QQHLAGGLML CPSSAPGLIL MELKQAKLNL
201: TRTTNDLADI RASVESFNKK IEKERISLEK TRERLTLNSS KISSLEAELN QTRLKVQLAK DAEIKGSFDN PMDIARELQK LTSEAEDFKK MGEAAKSEVL
301: KAISEIEQTK ARIKTAEIRL VAAKKMKEAA RAAEVIALAE IKALSNSESS HGVLLQKPDG VTLSFEEYSA LTCRAREAEE LSKGKVIEAM LQVDEANISK
401: VEILRRVEEA TEEIKTSKKA LEEALNRVEA ANRGKLAVEE ALRKWRSEHG QRRRSVQNST KFKNSYPAHH RRDSRMLDVN GLNLVSDGPS PVLKPTLSIG
501: QILSRKLLMP DEFEPGIHKD KSTVKQKMSL GQMLNKQGVD LPSHWKAERE SVPKQFPAKR KKFGFGRFSL LLTKQKGIGC LPLSAEFLSI PSTLPLRKGI
601: MGVRVGLLFL VVLGISWACD ARQLQTSDLS SKSIGFSDFS VVLMNSLPKE GEALALEPDD GNENVCTMCE RLITEALDLL AENRTQKLII EMLHATCSEV
701: QSFKQQCITL VDYYAALIFS ELALITPGNF CEKANLCGPT FTAGQLYQDS CVFCRHAVDE VLIKLRDPDT QLEILELLLK GCDAVEGLVR KCKRMVFEYG
801: PIILNNTERF LEKNDVCTTV HACGVPPAAS VEEAVAKVSD S

Best Arabidopsis Sequence Match ( AT2G38370.2 )
(BLAST)

001: MVVKTGFPIT DSSSSASMAE FPEPGTVNPD SDLSNGRAEK PEIDTSAPFE SVREAATRFG GFGFWRPSLN KLPDASQENI QEPDIMGLKA QAFELQRELI
101: VKERETLEVL KELEATKATV LKLQQRNEAY EEDTLREEVD SHIKPAGVVL KDLSQAKMNL CKIASIRESV EQLKNKLNEE RAALEKTRER LMEKSLKVFS
201: LEEEEVRVRF AKEGQTGEKD LGMLNEVQRL SRQAQEVKKT GENAELEVVK AMAETESTRD KIRTAKIRLV AARKMKEAAR EAEAVAIAEI EAVTGSMNVG
301: KAEAVTISAE EYSVLARSAR DAEEEARKRV EDAMSRVEEA NVSKKDVLKK VDEAAQEIET SKRVLEEAVE RVDAANASKI EAEEALRKWR SENGQRRRLS
401: SSVNNTSKFK SRRETTTRLM DVNGLHLTYD VVDGSSSSST VPVLKPTMSI GQILSKKLLL AEDSDMNVAN ERRKMSLGQM LAKNSSSDKT VSKRSEGKEN
501: EKRTKTRKRK SFGFAKISVL LNKESKNKKK KKKIALNLR

Arabidopsis Description

Plant protein of unknown function (DUF827) [Source:TAIR;Acc:AT2G38370]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.